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Record W1664207298

IDENTIFICATION OF ANDEAN FELID FECES USING PCR-RFLP

2006· article· en· W1664207298 on OpenAlexaff
E. Daniel Cossíos, Bernard Angers

Bibliographic record

VenueBiodiversity Heritage Library (Smithsonian Institution) · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsUniversité de Montréal
Fundersnot available
KeywordsFecesBiologyIdentification (biology)ZoologyVeterinary medicineMicrobiologyEcologyMedicine
DOInot available

Abstract

fetched live from OpenAlex

Scat analysis is a useful method to determinedistribution, abundance and diet of animals(Putman, 1984; Kohn and Wayne, 1997;Wasser et al., 2004). These methods are par-ticularly relevant for monitoring elusive andsecretive carnivores for which feces are oftenthe only available materials (Foran et al., 1997;Riddle et al., 2003). As feces of similar-sizedcarnivore species can resemble each other inmorphology and composition, distinguishingamong them can be problematic (Davidson etal., 2002; Prugh and Ritland, 2005). Develop-ment of methods for identification of the spe-cies from which feces originated is crucial forscat collection-based monitoring programs.DNA methods on scat use intestinal cells ofthe animal that are incorporated into feces.Molecular scatology has been demonstratedto be an efficient method to identify carnivorespecies in a large number of publications,including felids (e.g. Farrel et al., 2000; Ernestet al., 2000; Palomares et al., 2002; Wan et al.,2003; Zuercher et al., 2003). However, no pro-tocol specific to Andean felids has been pub-lished. Several projects focussing on Andeancat (

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.183
Teacher spread0.172 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2006
Admission routes1
Has abstractyes

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