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Record W167048033 · doi:10.1096/fasebj.21.5.a125-c

Bacterial DNA promotes neutrophil adhesion to endothelial cells

2007· article· en· W167048033 on OpenAlexafffund
Levente József, Driss El Kebir, Tarek Khreiss, János G. Filep

Bibliographic record

VenueThe FASEB Journal · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBlood disorders and treatments
Canadian institutionsUniversité de MontréalHôpital Maisonneuve-Rosemont
FundersCanadian Institutes of Health Research
KeywordsCpG siteDNAMolecular biologyDNA methylationCell adhesionAdhesionUmbilical veinChemistryBiologyGeneGene expressionBiochemistryIn vitro

Abstract

fetched live from OpenAlex

Bacterial DNA can be detected in the absence of bacteria in chronic inflammatory conditions. Bacterial DNA is emerging as an important regulator of functions of human neutrophil granulocytes. Bacterial DNA contains short sequences of nonmethylated CpG dinucleotides (CpG‐DNA) that are recognized by TLR‐9. We investigated the impact of CpG‐DNA on neutrophil adherence to human umbilical vein endothelial cells (HUVEC). HUVEC express TLR‐9 and respond to CpG‐DNA (0.2–20 μg/ml), but not to thymus DNA, with increased expression of E‐selectin and ICAM‐1 protein and mRNA. Methylation of cytosines in CpG‐DNA resulted in a complete loss of activity. Neutrophil adhesion to HUVEC activated with CpG‐DNA was markedly enhanced under low shear conditions. The number of adherent neutrophils was further enhanced when the adhesion assay was performed in the presence of CpG‐DNA, indicating that CpG‐DNA activates both neutrophils and HUVEC. The adhesive interactions were blocked by antibodies against CD18 (~70% inhibition), E‐selectin and L‐selectin. Combination of the three antibodies inhibited adhesion by 87%. These results identify HUVEC as a target for bacterial DNA and indicate that by enhancing neutrophil adhesion to endothelial cells bacterial DNA may contribute to maintenance and aggravation of the inflammatory response. (Supported by CIHR grant MOP‐67054).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.231
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes2
Has abstractyes

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