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Record W1673112447 · doi:10.1111/acv.12045

Low <scp>MHC</scp> variation in the polar bear: implications in the face of <scp>A</scp>rctic warming?

2013· article· en· W1673112447 on OpenAlexafffund
Diana S. Weber, Peter J. Van Coeverden de Groot, E. Peacock, Mark D. Schrenzel, D. A. Perez, Sufi M. Thomas, Jennifer Shelton, C. K. Else, Laura Darby, Luis E. Acosta, Christopher M. Harris, Jacob P. Youngblood, Peter T. Boag, Rob DeSalle

Bibliographic record

VenueAnimal Conservation · 2013
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine animal studies overview
Canadian institutionsGovernment of NunavutQueen's University
FundersOffice of Polar ProgramsNunavut Wildlife Management BoardNational Science Foundation
KeywordsBiologyMajor histocompatibility complexAlleleLinkage disequilibriumHaplotypeEvolutionary biologyGenetic diversityGeneticsDisequilibriumRange (aeronautics)Genetic variationBalancing selectionEcologyImmune systemGenePopulation

Abstract

fetched live from OpenAlex

Abstract Animals in the A rctic have low pathogen diversity but with rapid climate warming, this is expected to change. One insidious consequence of climate change is exposure of A rctic species to new pathogens derived from more southern species expanding their range northward. To assess potential vulnerability of polar bears to disease exposure, we examined genetic variation in major histocompatibility complex ( MHC ) loci (part of immune system) in C anadian polar bears and found low genetic diversity, consistent with long‐standing exposure to low pathogen/parasite loads. All polar bears surveyed showed maximum linkage disequilibrium between DRB / DQB loci and 12% of individuals had a duplicated DQB gene haplotype. These results may reflect balancing selection at these loci, a response to an earlier immune‐challenge and/or be artifacts of polar bear‐brown bear divergence. Consistent with the latter, we found one DQA allele in polar bears that was also a brown bear DQA allele. The reported low MHC diversity and high linkage disequilibrium may have serious implications for polar bear resistance to new pathogens, which would be maladaptive to species in an environment undergoing rapid climate change, such as the A rctic.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.026
Threshold uncertainty score0.981

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.241
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations28
Published2013
Admission routes2
Has abstractyes

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