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Record W16886753 · doi:10.1096/fasebj.21.6.a1302

Tom40 import and TOM complex assembly kinetics in subsarcolemmal and intermyofibrillar mitochondria

2007· article· en· W16886753 on OpenAlexaff
Bertrand Joseph, Peter J. Adhihetty, David A. Hood

Bibliographic record

VenueThe FASEB Journal · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsYork University
Fundersnot available
KeywordsMitochondrionChemistryCell biologyBiochemistryBiology

Abstract

fetched live from OpenAlex

The insertion of nuclear‐derived proteins into mitochondria is facilitated by the translocases of the outer membrane (TOM) complex. Tom40 is the main component of this complex. Its import and assembly has not been characterized in skeletal muscle. Thus, our purpose was to compare the import and assembly of Tom40 in muscle subsarcolemmal (SS) and intermyofibrillar (IMF) mitochondria. Tom40 protein levels were not different between SS and IMF mitochondria. However, Tom40 import into the outer membrane was higher (p<0.05) in SS mitochondria at all time points (5, 10, 20 min) when compared to IMF mitochondria. Tom40 assembly was monitored using blue native electrophoresis. Tom40 first assembles into a ~250kDa complex (Intermediate I), followed by a ~120 kDa complex (Intermediate II), before its final insertion into the ~380 kDa TOM complex. In IMF mitochondria, 70–80% of Tom40 was incorporated into Intermediate I by 5 min, whereas only 40–50% was found in Intermediate I in SS mitochondria. However, the sequential incorporation of Tom40 into Intermediate II was less rapid in IMF mitochondria, and only 45% of Tom40 was incorporated into the final TOM complex by 60 min. In contrast, SS mitochondria incorporated 65–70% of Tom40 by 60 min. Thus, despite similar levels of steady state Tom40 protein content, the import and assembly of Tom40 into the TOM complex differs among muscle mitochondrial subtypes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.266
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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