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Abstract 17066: A Metabolic Basis for Histone Acetylation and a Potential Mechanism of Epigenetic Regulation in Right Ventricular Failure

2011· article· en· W17013656 on OpenAlexaff
Gopinath Sutendra, Peter Dromparis, Alois Haromy, Trevor H. Stenson, Evangelos D. Michelakis

Bibliographic record

VenueCirculation · 2011
Typearticle
Languageen
FieldMedicine
TopicCardiovascular Function and Risk Factors
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsMedicineAcetylationEpigeneticsRight ventricular failureMechanism (biology)HistoneHeart failureCardiologyInternal medicineCell biologyGeneticsGeneBiology

Abstract

fetched live from OpenAlex

Right ventricular (RV) failure is the most critical determinant of morbidity and mortality in patients with pulmonary arterial hypertension (PAH). There is an increasing awareness of important differences between the left ventricle (LV) and RV. Recently, histone deacetylase (HDAC) inhibitors, which increase histone acetylation, have had promising results on maladaptive LV hypertrophy. However, in RV hypertrophy (RVH), HDAC inhibition resulted in RV failure. Recently, nuclear acetylation processes have been shown to be dependent, in part, on the mitochondria. Since there is evidence of mitochondrial diversity between the RV and LV, we hypothesized that histone acetylation may have a metabolic basis and explain the transition to RV failure. In order to study histone acetylation and its relation to metabolism and disease progression in the failing RV, we used a rat model of monocrotaline (MCT)-induced PAH, in which we studied animals with normal RV function (n=6, RVSP=38±2 mmHg, CO=102±2 ml/min and RV/LV+Septum=22±1), compensated RVH (CRV; n=10, RVSP=66±8 mmHg, CO=80±13 ml/min and RV/LV+Septum=48±3, 2-3 weeks post-MCT) and decompensated RVH (DRV; n=9, RVSP=52±2 mmHg, CO=67±10 ml/min and RV/LV+Septum =58±2, 4-6 weeks post MCT). Compared to control, the myocardium (RV free wall) from CRV animals exhibited decreased mitochondrial activity shown by increased mitochondrial membrane potential and decreased mitochondrial-derived reactive oxygen species (mROS). This was associated with increased RV glucose uptake measured by PET in vivo, suggesting a shift of metabolism away from mitochondria towards glycolysis. CRV animals also showed decreased histone-3 (H3) acetylation (IHC/immunoblot). In contrast, DRV animals showed decreased RV glucose uptake, increased mROS as well as induction of the mitochondrial uncoupling-protein 2 in DRV myocardium. These metabolic/mitochondrial changes were associated with an increase in H3 acetylation in the DRV compared to the CRV animals. We show that metabolism and H3 acetylation closely follow mitochondrial remodeling and that these changes separate CRV from DRV potentially opening a new window in our understanding of RV failure.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.230
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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