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Evidence suggesting three respiratory oscillators in frogs (Rana catasbeiana): implications for the Oscillator Homology Hypothesis and the evolution of breathing.

2008· article· en· W171508818 on OpenAlexafffund
Maryana Duchcherer, Richard J. A. Wilson

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBat Biology and Ecology Studies
Canadian institutionsUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyNeuroscienceAmphibianPriming (agriculture)AnatomyEvolutionary biologyEcologyBotany

Abstract

fetched live from OpenAlex

Recent data in mammals and frogs suggest at least two separate respiratory oscillators, one who's activity coincides with the powerstroke of lung inflation (the preBötzinger Complex and the lung oscillator, respectively) and a second priming oscillator, who's activity appears to precede the powerstroke (the PreI and buccal oscillators, respectively). According to the Oscillator Homology Hypothesis, the oscillators in mammals evolved from the same ancestors as those in lower vertebrates. However, the priming oscillator in mammals and frogs maybe located in different rhombomeric segments and their rostral‐caudal location relative to the powerstroke oscillator may be reversed. Using the “sheep‐dip” technique, a new method for systematically surveying respiratory rhythm promoting sites in lower vertebrates, we provide evidence suggesting that the lung oscillator in late‐stage metamorphic frogs can, itself, be subdivided into a powerstroke and a novel priming component. As in mammals, the novel lung‐priming component in frogs appears to extend more rostrally than the powerstroke component. These data suggest the Oscillator Homology Hypothesis has to be revised: the mammalian PreI and PreBötzinger Complex oscillators may have evolved from the same two components that gave rise to the frog lung oscillator and not from the buccal oscillator as previously thought. Work funded by NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.076
GPT teacher head0.246
Teacher spread0.171 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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