MétaCan
Menu
Back to cohort

Cathepsin B activity is required for NALP3-induced caspase-1 activation, lysosomal dysfunction and cell death in macrophages. (135.81)

2009· article· en· W175904256 on OpenAlexaff
Antonio Bruni, Soon-Duck Ha, Luigi Franchi, Gabriel Núñez, Sung Ouk Kim

Bibliographic record

VenueThe Journal of Immunology · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammasome and immune disorders
Canadian institutionsWestern University
Fundersnot available
KeywordsNALP3Caspase 1Cathepsin BProgrammed cell deathCathepsinBiologyCell biologyPyroptosisInflammasomeChemistryApoptosisImmunologyBiochemistryInflammation

Abstract

fetched live from OpenAlex

Abstract The nucleotide-binding and leucine-rich repeats (NLRs) are a family of innate immune receptors sensing various pathogen- and danger-associated molecules within the cytosol. Activation of NLRs such as NALP3 induces the secretion of inflammatory cytokines such as interleukin (IL)-1ß and rapid cell death, through caspase-1 activation. To date, the mechanisms associated with NALP3 activation and cell death remain poorly defined. This study examined whether lysosomal membrane dysfunction or the lysosomal protease, cathepsin B (CTSB), are involved in cell death induced by NALP3. Wild-type (WT), NALP3-, ASC-, caspase-1- and CTSB-deficient immortalized bone marrow-derived macrophages were exposed to the NALP3 activator ATP. ATP treatment caused lysosomal dysfunction measured by loss of acridine orange, caspase-1 activation and rapid cell death in WT but not in NALP3-, ASC-, caspase-1- or CTSB-deficient macrophages. Mutant Pseudomonas aeruginosa (exotoxin U deficient) induces IPAF-dependent IL-1ß release and cell death. The mutant bacteria induced cell death and IL-1ß release in WT and CTSB-deficient macrophages but not in IPAF-, ASC- or caspase-1-deficient macrophages. Altogether, these results suggest that cathepsin B is required for NALP3-induced but not IPAF-induced caspase-1 activation and lysosomal dysfunction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.242
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

Explore more

Same venueThe Journal of ImmunologySame topicInflammasome and immune disordersFrench-language works237,207