Paradox of Protection: Preferential Recognition of CD4-induced Epitopes by Anti-HIV-1 ADCC Antibodies
Bibliographic record
Abstract
Antibodies capable of eliminating HIV-1-infected cells via antibody-dependent cellular cytotoxicity (ADCC) are present in most HIV-1-infected individuals. The ability of antibodies to trigger ADCC is associated with slower progression to AIDS, as well as vaccine-conferred protection from HIV-1 infection in the RV144 trial (Baum, L. L., et al., 1996Baum L.L. Cassutt K.J. Knigge K. Khattri R. Margolick J. Rinaldo C. Kleeberger C.A. Nishanian P. Henrard D.R. Phair J. HIV-1 gp120-specific Antibody-dependent Cell-mediated Cytotoxicity Correlates with Rate of Disease Progression.J. Immunol. 1996; 157: 2168-2173Crossref PubMed Google Scholar, Haynes, B. F., et al., 2012Haynes B.F. Gilbert P.B. Mcelrath M.J. Zolla-Pazner S. Tomaras G.D. Alam S.M. Evans D.T. Montefiori D.C. Karnasuta C. Sutthent R. Liao H.X. Devico A.L. Lewis G.K. Williams C. Pinter A. Fong Y. Janes H. Decamp A. Huang Y. Rao M. Billings E. Karasavvas N. Robb M.L. Ngauy V. De Souza M.S. Paris R. Ferrari G. Bailer R.T. Soderberg K.A. Andrews C. Berman P.W. Frahm N. De Rosa S.C. Alpert M.D. Yates N.L. Shen X. Koup R.A. Pitisuttithum P. Kaewkungwal J. Nitayaphan S. Rerks-Ngarm S. Michael N.L. Kim J.H. Immune-correlates Analysis of an HIV-1 Vaccine Efficacy Trial.N. Engl. J. Med. 2012; 366: 1275-1286Crossref PubMed Scopus (1447) Google Scholar). The RV144 trial enrolled over 16,000 subjects in Thailand. Half of the subjects were immunized with a prime-boost vaccine regimen that, although did not induce significant anti-HIV CD8 T cell or broad neutralizing antibody responses, did induce robust non-neutralizing antibody responses with ADCC function. Although ADCC antibodies can target a wide array of epitopes within the HIV-1 envelope (Env), recent studies have demonstrated that epitopes revealed within Env upon entering the CD4-bound conformation are preferentially targeted by ADCC antibodies within HIV-1-infected individuals and RV144 vaccinees (Bonsignori, M., et al., 2012Bonsignori M. Pollara J. Moody M.A. Alpert M.D. Chen X. Hwang K.K. Gilbert P.B. Huang Y. Gurley T.C. Kozink D.M. Marshall D.J. Whitesides J.F. Tsao C.Y. Kaewkungwal J. Nitayaphan S. Pitisuttithum P. Rerks-Ngarm S. Kim J.H. Michael N.L. Tomaras G.D. Montefiori D.C. Lewis G.K. Devico A. Evans D.T. Ferrari G. Liao H.X. Haynes B.F. Antibody-dependent Cellular Cytotoxicity-mediating Antibodies from an HIV-1 Vaccine Efficacy Trial Target Multiple Epitopes and Preferentially Use the VH1 Gene Family.J. Virol. 2012; 86: 11521-11532Crossref PubMed Scopus (304) Google Scholar, Veillette, M., et al., 2015Veillette M. Coutu M. Richard J. Batraville L.A. Dagher O. Bernard N. Tremblay C. Kaufmann D.E. Roger M. Finzi A. The HIV-1 gp120 CD4-bound Conformation is Preferentially Targeted by Antibody-dependent Cellular Cytotoxicity-mediating Antibodies in Sera From HIV-1-infected Individuals.J. Virol. 2015; 89: 545-551Crossref PubMed Scopus (140) Google Scholar). The HIV-1 Env protein binds to the cell-surface molecule CD4 to allow virion entry and this CD4 binding causes a conformational change in Env. In the current issue of EBioMedicine, Williams et al. provide further evidence of preferential targeting of the CD4-bound conformation of Env by ADCC antibodies in a Kenyan cohort infected with HIV-1 (Williams, K. L., et al., 2015Williams K.L. Cortez V. Dingens A.S. Gach J.S. Rainwater S. Weis J.F. Chen X. Spearman P. Forthal D.N. Overbaugh J. HIV-specific CD4-induced Antibodies Mediate Broad and Potent Antibody-dependent Cellular Cytotoxicity Activity and Are Commonly Detected in Plasma From HIV-infected humans.EBioMedicine. 2015; 2: 1464-1477Summary Full Text Full Text PDF PubMed Scopus (43) Google Scholar). In their manuscript, Williams et al. demonstrate that GFP-tagged virus-like particles can be employed to identify and sort Env-specific B-cells (Williams, K. L., et al., 2015Williams K.L. Cortez V. Dingens A.S. Gach J.S. Rainwater S. Weis J.F. Chen X. Spearman P. Forthal D.N. Overbaugh J. HIV-specific CD4-induced Antibodies Mediate Broad and Potent Antibody-dependent Cellular Cytotoxicity Activity and Are Commonly Detected in Plasma From HIV-infected humans.EBioMedicine. 2015; 2: 1464-1477Summary Full Text Full Text PDF PubMed Scopus (43) Google Scholar). These B-cells' heavy and light chain immunoglobulin genes were sequenced then HIV-1-specific antibodies were generated and screened for anti-viral functions, such as ADCC. Utilizing this technology, Williams et al. identified three ADCC antibodies from an HIV-1 subtype A-infected donor. Two antibodies recognized epitopes revealed within the CD4-bound conformation of Env, while one recognized an epitope within the V3 loop of Env. Despite identifying an anti-V3 antibody capable of mediating ADCC, the anti-V3 specificity contributed very little to the ADCC response of the donor's plasma. Indeed, when the authors introduced mutations abrogating Fc receptor binding (i.e., LALA mutations) within each of the three monoclonal antibodies and used the mutants to block ADCC triggered by whole plasma, they observed robust inhibition by the LALA versions of the two antibodies specific for CD4-induced epitopes and no inhibition by the LALA version of the anti-V3 monoclonal antibody. To establish that CD4-induced epitopes were commonly targeted amongst the Kenyan cohort of the monoclonal antibody donor, the authors further demonstrated that LALA versions of the two antibodies specific for CD4-induced epitopes robustly inhibited the plasma ADCC of nine additional donors. These results are consistent with previous research demonstrating that ADCC-competent anti-variable loop antibodies are relatively rare amongst monoclonal antibodies isolated from RV144 vaccinees (Bonsignori, M., et al., 2012Bonsignori M. Pollara J. Moody M.A. Alpert M.D. Chen X. Hwang K.K. Gilbert P.B. Huang Y. Gurley T.C. Kozink D.M. Marshall D.J. Whitesides J.F. Tsao C.Y. Kaewkungwal J. Nitayaphan S. Pitisuttithum P. Rerks-Ngarm S. Kim J.H. Michael N.L. Tomaras G.D. Montefiori D.C. Lewis G.K. Devico A. Evans D.T. Ferrari G. Liao H.X. Haynes B.F. Antibody-dependent Cellular Cytotoxicity-mediating Antibodies from an HIV-1 Vaccine Efficacy Trial Target Multiple Epitopes and Preferentially Use the VH1 Gene Family.J. Virol. 2012; 86: 11521-11532Crossref PubMed Scopus (304) Google Scholar). Further, this is consistent with an absorption experiment demonstrating that the majority of ADCC antibodies contributing to plasma ADCC responses are not directed to variable loop epitopes (Veillette, M., et al., 2015Veillette M. Coutu M. Richard J. Batraville L.A. Dagher O. Bernard N. Tremblay C. Kaufmann D.E. Roger M. Finzi A. The HIV-1 gp120 CD4-bound Conformation is Preferentially Targeted by Antibody-dependent Cellular Cytotoxicity-mediating Antibodies in Sera From HIV-1-infected Individuals.J. Virol. 2015; 89: 545-551Crossref PubMed Scopus (140) Google Scholar). Collectively, the data from Williams et al. and others demonstrates that, while some anti-V3 antibodies may be able to trigger ADCC, these antibodies contribute little to the capacity of plasma to clear infected cells via ADCC. Further research into the ability of anti-V3 antibodies to trigger ADCC, however, may prove fruitful for identifying ADCC antibodies capable of recognizing HIV-1 Env independently of CD4. Much evidence points towards a role for Vpu and Nef in the evasion of ADCC responses by HIV-1-infected cells (Veillette, M., et al., 2014Veillette M. Desormeaux A. Medjahed H. Gharsallah N.E. Coutu M. Baalwa J. Guan Y. Lewis G. Ferrari G. Hahn B.H. Haynes B.F. Robinson J.E. Kaufmann D.E. Bonsignori M. Sodroski J. Finzi A. Interaction with Cellular CD4 Exposes HIV-1 Envelope Epitopes Targeted by Antibody-dependent Cell-mediated Cytotoxicity.J. Virol. 2014; 88: 2633-2644Crossref PubMed Scopus (199) Google Scholar). Both Vpu and Nef downregulate cell surface CD4 and prevent Env from entering the CD4-bound conformation prominently targeted by ADCC antibodies (Veillette, M., et al., 2014Veillette M. Desormeaux A. Medjahed H. Gharsallah N.E. Coutu M. Baalwa J. Guan Y. Lewis G. Ferrari G. Hahn B.H. Haynes B.F. Robinson J.E. Kaufmann D.E. Bonsignori M. Sodroski J. Finzi A. Interaction with Cellular CD4 Exposes HIV-1 Envelope Epitopes Targeted by Antibody-dependent Cell-mediated Cytotoxicity.J. Virol. 2014; 88: 2633-2644Crossref PubMed Scopus (199) Google Scholar, Veillette, M., et al., 2015Veillette M. Coutu M. Richard J. Batraville L.A. Dagher O. Bernard N. Tremblay C. Kaufmann D.E. Roger M. Finzi A. The HIV-1 gp120 CD4-bound Conformation is Preferentially Targeted by Antibody-dependent Cellular Cytotoxicity-mediating Antibodies in Sera From HIV-1-infected Individuals.J. Virol. 2015; 89: 545-551Crossref PubMed Scopus (140) Google Scholar). Vpu also downregulates cellular expression of tetherin, a protein involved in keeping HIV-1 virions at the cell surface and thus increasing epitope availability (Van Damme, N., et al., 2008Van Damme N. Goff D. Katsura C. Jorgenson R.L. Mitchell R. Johnson M.C. Stephens E.B. Guatelli J. The interferon-induced Protein BST-2 Restricts HIV-1 Release and is Downregulated from the Cell Surface by the Viral Vpu Protein.Cell Host Microbe. 2008; 3: 245-252Summary Full Text Full Text PDF PubMed Scopus (841) Google Scholar). Additionally, motifs within the membrane proximal region of Env serve to limit Env expression on the surface of infected cells (Von Bredow, B., et al., 2015Von Bredow B. Arias J.F. Heyer L.N. Gardner M.R. Farzan M. Rakasz E.G. Evans D.T. Envelope Glycoprotein Internalization Protects Human and Simian Immunodeficiency Virus-infected Cells from Antibody-dependent Cell-mediated Cytotoxicity.J. Virol. 2015; 89: 10648-10655Crossref PubMed Scopus (50) Google Scholar). The Vpu and Nef-mediated down regulation of CD4 at first blush appears paradoxical to the notion that ADCC antibodies targeting the CD4-bound conformation of Env protect from HIV-1 infection. In their study, Williams et al. demonstrated that their two monoclonal antibodies specific for CD4-induced epitopes can inhibit HIV-1 replication in a CD4+ T cell line, CEM.NKr-CCR5 (Williams, K. L., et al., 2015Williams K.L. Cortez V. Dingens A.S. Gach J.S. Rainwater S. Weis J.F. Chen X. Spearman P. Forthal D.N. Overbaugh J. HIV-specific CD4-induced Antibodies Mediate Broad and Potent Antibody-dependent Cellular Cytotoxicity Activity and Are Commonly Detected in Plasma From HIV-infected humans.EBioMedicine. 2015; 2: 1464-1477Summary Full Text Full Text PDF PubMed Scopus (43) Google Scholar). These data demonstrate that these monoclonal antibodies can target the Env of the utilized isolate as it naturally appears on the surface of infected cells. Questions remain, however, about the competency of the Nef and Vpu of the viral isolate utilized, as well as the extent of CD4 downregulation on CEM.NKr-CCR5 cells infected with the viral isolate. An important research priority in this field is to identify epitopes and mechanisms whereby ADCC antibodies can target HIV-infected cells for elimination, regardless of viral Env conformation. There is much hope that the mechanism of ADCC can, beyond the 31% efficacy of the RV144 trial, be exploited for prevention of HIV-1 infection through vaccination (Wren, L. H., et al., 2013Wren L.H. Stratov I. Kent S.J. Parsons M.S. Obstacles to Ideal Anti-HIV Antibody-dependent Cellular Cytotoxicity Responses.Vaccine. 2013; 31: 5506-5517Crossref PubMed Scopus (17) Google Scholar). Further, ADCC may assist in effort to develop a cure for HIV-1 infection through eliminating reactivated latently infected cells, since reactivating latently infected cells alone, without immune clearance, may be insufficient (Lee, W. S., et al., 2015Lee W.S. Parsons M.S. Kent S.J. Lichtfuss M. Can HIV-1-Specific ADCC Assist the Clearance of Reactivated Latently Infected Cells?.Front. Immunol. 2015; 6: 265Crossref PubMed Scopus (26) Google Scholar, Wren, L. H., et al., 2013Wren L.H. Stratov I. Kent S.J. Parsons M.S. Obstacles to Ideal Anti-HIV Antibody-dependent Cellular Cytotoxicity Responses.Vaccine. 2013; 31: 5506-5517Crossref PubMed Scopus (17) Google Scholar). To realize these goals there is likely a need to identify and utilize ADCC antibodies capable of recognizing non-CD4-bound Env epitopes, such as epitopes within V3, which would allow for the elimination of latent viruses or transmitted/founder viruses that fully or sufficiently downregulate CD4 and render ADCC antibodies targeting CD4-induced epitopes non-functional. A major caveat of targeting the V3 region is the high diversity in this region between viruses. Importantly, Williams et al. provide proof of principle that epitopes present on Env not bound to CD4 can be targeted for ADCC by antibodies specific for CD4-independent epitopes (Williams, K. L., et al., 2015Williams K.L. Cortez V. Dingens A.S. Gach J.S. Rainwater S. Weis J.F. Chen X. Spearman P. Forthal D.N. Overbaugh J. HIV-specific CD4-induced Antibodies Mediate Broad and Potent Antibody-dependent Cellular Cytotoxicity Activity and Are Commonly Detected in Plasma From HIV-infected humans.EBioMedicine. 2015; 2: 1464-1477Summary Full Text Full Text PDF PubMed Scopus (43) Google Scholar). The authors declare no conflicts of interest. MSP is supported by a fellowship from the Canadian Institutes of Health Research (CIHR) and SJK by a fellowship from the Australian National Health and Medical Research Council. HIV-specific CD4-induced Antibodies Mediate Broad and Potent Antibody-dependent Cellular Cytotoxicity Activity and are Commonly Detected in Plasma from HIV-infected HumansHIV-specific antibodies (Abs) can reduce viral burden by blocking new rounds of infection or by destroying infected cells via activation of effector cells through Fc–FcR interaction. This latter process, referred to as antibody-dependent cellular cytotoxicity (ADCC), has been associated with viral control and improved clinical outcome following both HIV and SIV infections. Here we describe an HIV viral-like particle (VLP)-based sorting strategy that led to identification of HIV-specific memory B cells encoding Abs that mediate ADCC from a subtype A-infected Kenyan woman at 914 days post-infection. Full-Text PDF Open Access
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.001 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.001 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".