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Record W1882275176 · doi:10.4141/cjas2011-002

cDNA cloning, characterization and expression analysis of toll-like receptor 4 gene in goose

2011· article· en· W1882275176 on OpenAlexvenueno aff
Fang Wang, Lizhi Lu, Hao Yuan, Yong Tian, Jinjun Li, Junda Shen, Zhengrong Tao, Yan Fu

Bibliographic record

VenueCanadian Journal of Animal Science · 2011
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Response and Inflammation
Canadian institutionsnot available
Fundersnot available
KeywordsGooseComplementary DNABiologyGeneCloning (programming)Rapid amplification of cDNA endsSignal peptideAmino acidMolecular biologyMessenger RNAReceptorToll-like receptorGene expressionTransmembrane domainMolecular cloningGeneticsPeptide sequenceInnate immune system

Abstract

fetched live from OpenAlex

Wang, F., Lu, L., Yuan, H., Tian, Y., Li, J., Shen, J., Tao, Z. and Fu, Y. 2011. cDNA cloning, characterization and expression analysis of toll-like receptor 4 gene in goose. Can. J. Anim. Sci. 91: 371–377. Toll-like receptor 4 (TLR4) plays an important role in activating proinflammatory pathways in response to various pathogens and fatty acids in mammals. In avian species, the TLR4 gene has been reported in chicken and zebra finch. We describe here the cloning and characterization of the TLR4 in goose. Goose TLR4 encodes an 843-amino-acid protein, which contains a signal peptide, extracelluar leucine-rich repeat domain, a transmembrane region and a toll-interleukin-1 receptor signaling domain. The deduced goose TLR4 protein shows more than 70% identity to chicken and zebra finch, but less than 50% identity to its mammalian counterparts. Quantitative real-time analysis reveals that the goose TLR4 mRNA is more expressed in abdominal fat and liver. We also identify the changes of goose TLR4 mRNA expression pattern after over-feeding treatment, which may reveal that the expression of goose TLR4 could respond to over-feeding treatment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.221
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2011
Admission routes1
Has abstractyes

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