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Record W1906512958 · doi:10.1186/1710-1492-10-s2-a47

Trafficking of TNF via recycling endosomes in neutrophils

2014· article· en· W1906512958 on OpenAlexaffvenue
Nutan Srivastava, Paige Lacy

Bibliographic record

VenueAllergy Asthma and Clinical Immunology · 2014
Typearticle
Languageen
FieldMedicine
TopicAsthma and respiratory diseases
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsEndosomeSecretionProinflammatory cytokineCytokineTumor necrosis factor alphaInnate immune systemCell biologyImmunologyInflammationImmune systemBiologyIntracellularEndocrinology

Abstract

fetched live from OpenAlex

Neutrophils are highly abundant innate immune cells that contribute to asphyxic episodes of acute asthma exacerbations, and secrete the proinflammatory cytokine tumour necrosis factor-α (TNF). Recycling endosomes (REs) are specialized secretory compartments that perform multiple functions including trafficking of cytokines to cell surfaces, although these are not characterized in neutrophils. Our objective is to identify trafficking components in neutrophils that may contribute to cytokine secretion. The effect of bacterial lipopolysaccharide (LPS) stimulation on the trafficking of stored and newly synthesized TNF was determined by treatment of human peripheral blood neutrophils with or without cycloheximide. To visualize intracellular TNF, neutrophils were adhered to glass slides and treated with LPS for 1 h (10 ng/ml). Colocalization of TNFα in neutrophils was performed with transferrin-Alexa 488 and anti-VAMP3 (markers for RE), anti-CD63 and anti-CD66b a membrane markers for the primary and secondary granules in neutrophils, respectively. We also determined Rab5 and Rab7 colocalization with TNF (markers for early and late endosomes, respectively). Imaging was carried out by Deltavision OMX super resolution microscopy. LPS induced 30-40% TNF secretion from stored sources, with the remainder newly synthesized. We found that neutrophils possess REs as determined by transferrin uptake and VAMP3 labeling. TNF also colocalized with REs, primary and secondary granules as well as early and late endosomes, suggesting multiple sites of TNF storage and trafficking in neutrophils. However, TNF only colocalized with VAMP3 around periphery of cells after 1 h stimulation with LPS, suggesting TLR4-induced TNF trafficking via REs. The present study provides evidence that movement of TNF VAMP-3 vesicles towards the cell periphery in response to LPS. This suggests that neutrophils utilize REs for trafficking of TNF to the cell surface in response to TLR4 signalling. These findings contribute to our understanding of how neutrophils package, transport, and release cytokines.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.306
Teacher spread0.289 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2014
Admission routes2
Has abstractyes

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