MétaCan
Menu
Back to cohort

Assembly of tropical plant diversity on a local scale: Cyrtandra (Gesneriaceae) on Mount Kerinci, Sumatra

2004· article· en· W1930719466 on OpenAlexaff
Gemma L. C. Bramley, R. Toby Pennington, Radhiah Zakaria, S. Tjitrosoedirdjo, Quentin Cronk

Bibliographic record

VenueBiological Journal of the Linnean Society · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant and Fungal Species Descriptions
Canadian institutionsUniversity of British Columbia
FundersNational Eye InstituteBiotechnology and Biological Sciences Research Council
KeywordsBiologyEcologyLineage (genetic)Species diversityAlpha diversityGenetic algorithmRainforestEndemismGamma diversity

Abstract

fetched live from OpenAlex

At a regional scale, the high species numbers (gamma diversity) of tropical forests have been explained by either a gradual accumulation of species through time (museum hypothesis) or, by contrast, rapid recent speciation in large genera. However, the origins of local rain forest diversity (alpha diversity) have been given little attention. Cyrtandra (Gesneriaceae), an understorey genus in the highly species-rich Indo-Malayan rain forest, has considerable capacity for producing local endemics, making it particularly suitable for studying diversity on a local scale. We sampled Cyrtandra species from one community on Mount Kerinci, Sumatra, and phylogenetic analyses of ITS sequences suggest that this community is an assembly of three distinct phyletic lineages: (1) a group of herbaceous or subshrub plants of Bornean affinity, (2) one member of a group of widespread shrubs forming Cyrtandra section Dissimiles and (3) a second group of shrubs. The evolutionary origin of this community is therefore not a result of rapid and recent speciation: it is assembled from species resulting from a gradual accumulation of diversity through time (museum hypothesis), although one lineage shows evidence of more recent, continuing speciation than the other two. The community includes two distantly related, apparently endemic species, but there is no evidence for a local adaptive radiation. The protection of representative species from each lineage would allow the conservation of genetic diversity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.014
Threshold uncertainty score0.028

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.221
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2004
Admission routes1
Has abstractyes

Explore more

Same venueBiological Journal of the Linnean SocietySame topicPlant and Fungal Species DescriptionsFrench-language works237,207