MétaCan
Menu
Back to cohort

Preservation of vascular glycocalyx ultrastructure

2008· article· en· W193727701 on OpenAlexaff
David Sims, Margaret M. Horne

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldMedicine
TopicTrauma, Hemostasis, Coagulopathy, Resuscitation
Canadian institutionsUniversity of Prince Edward Island
Fundersnot available
KeywordsFixativeGlutaraldehydeOsmium tetroxideGlycocalyxAqueous solutionChemistryChromatographyOsmiumFixation (population genetics)BiophysicsElectron microscopeBiochemistryOrganic chemistryBiology

Abstract

fetched live from OpenAlex

Preservation of vascular glycocalyx has proven problematic. Complex carbohydrates that constitute most of glycocalyx are disrupted by physiological stresses and aqueous fixatives. This study found that a non‐aqueous, osmium‐based fixative was superior to aqueous alternatives. Buffered aqueous fixative (2.5% glutaraldehyde in 0.05M sodium cacodylate, pH=7.3) was compared with a non‐aqueous fixative composed of 0.05% osmium tetroxide dissolved in fluorocarbon (FC‐72, 3M Co.). Samples of perfused rat aortas were processed for ultrastructural analysis immediately after initial fixation, or after various periods of time in non‐aqueous solvent, non‐aqueous fixative, buffered glutaraldehyde or aqueous buffer. Glycocalyx composed of mildly electron‐dense branching materials up to 600 nm tall was best preserved by non‐aqueous fixation followed by immediate processing. Post‐fixation delays for up to 24 hours in either non‐aqueous solvent or the solvent mixed with osmium did not substantially alter its appearance. However, the same samples, if post‐fixation‐treated with buffer solution or buffered glutaraldehyde for 30 minutes had no appreciable glycocalyx remaining. Non‐aqueous fixation offered the further advantage of exerting no osmotic forces, so there was no appreciable shrinking of cells or separation from connective tissues.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.260
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

Explore more

Same venueThe FASEB JournalSame topicTrauma, Hemostasis, Coagulopathy, ResuscitationFrench-language works237,207