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Record W1941115330 · doi:10.1111/bij.12657

Morphological and genetic analysis of sympatric dace within the<i>Rhinichthys cataractae</i>species complex: a case of isolation lost

2015· article· en· W1941115330 on OpenAlexafffundabout
Jennifer A. Ruskey, Eric B. Taylor

Bibliographic record

VenueBiological Journal of the Linnean Society · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIdentification and Quantification in Food
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Wildlife Federation
KeywordsBiologySympatric speciationZoologyIsolation (microbiology)Evolutionary biologyEcology

Abstract

fetched live from OpenAlex

The Nooksack dace (Pisces: an undescribed putative taxon within Rhinichthys) and longnose dace (Rhinichthys cataractae) are two forms within the R. cataractae species complex that are distinguishable from one another by mitochondrial (mt) DNA divergence of 2–3%, as well as by subtle morphological differences. The two forms are found in allopatry in south-eastern British Columbia (BC), Canada, and adjacent areas of western Washington, USA, and are sympatric in three streams in the lower Fraser River valley, BC, and may represent cryptic species. We assayed 12 morphometric traits and two meristic characters (N=582; 23 sampling locations) to test for diagnosability of the two dace, as well as to test for morphological differentiation by mtDNA type in sympatry. We then employed a 10-locus microsatellite DNA assay (N=374; 12 sampling locations) to test for genetic distinction between Nooksack dace and longnose dace in sympatry. We found that the two dace could not be reliably differentiated morphologically: there was overlap in all characters measured, and sampling location had a much larger effect on morphology than mtDNA group. Microsatellite analysis showed no distinction by mtDNA type in localities with sympatric dace, indicating complete admixture between the sympatric Nooksack dace and longnose dace. The Nooksack dace and longnose dace provide an example of ‘ephemeral speciation’: two lineages that, despite an estimated 1.1 Myr of isolation, have developed no apparent barriers to reproduction and appear to have collapsed into a single interbreeding population where they come into secondary contact. Nonetheless, the zone of secondary contact and the diagnosability of the Nooksack dace in terms of mtDNA represent significant aspects of the evolutionary legacy within R. cataractae and support its conservation importance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.800
Threshold uncertainty score0.212

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.082
GPT teacher head0.300
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2015
Admission routes3
Has abstractyes

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