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Record W1964736947 · doi:10.1136/jmg.2010.085068

Novel <i>FH</i> mutations in families with hereditary leiomyomatosis and renal cell cancer (HLRCC) and patients with isolated type 2 papillary renal cell carcinoma

2011· article· en· W1964736947 on OpenAlexaff
Betty Gardie, Audrey Remenieras, Darouna Kattygnarath, Johny Bombled, Sandrine-Hélène Lefèvre, Victoria Perrier-Trudova, Pierre Rustin, M. Barrois, Abdelhamid Slama, M.-F. Avril, D. Bessis, Olivier Caron, F. Caux, Patrick Collignon, I. Coupier, Hélène Dollfus, Catherine Dugast, B. Escudier, Laurence Faivre, Michael Field, Brigitte Gilbert‐Dussardier, Nicolas Janin, Y. Leport, Dominique Leroux, Dan Lipsker, F. Malthieu, B. McGilliwray, Christine Maugard, A. Méjean, Isabelle Mortemousque, Ghislaine Plessis, Bruce Poppe, C. Pruvost‐Balland, S. Rooker, J. Roume, Nadem Soufir, M. Steinraths, Min Tan, Christine Théodore, L. Thomas, P. Vabres, E. Van Glabeke, Jean‐Baptiste Méric, Virginie Verkarre, Gilbert Lenoir, V. Joulin, Véronica Cusin, Jean Feunteun, Bin Tean Teh, Brigitte Bressac–de Paillerets

Bibliographic record

VenueJournal of Medical Genetics · 2011
Typearticle
Languageen
FieldMedicine
TopicRenal cell carcinoma treatment
Canadian institutionsUniversité de MontréalVictoria General HospitalBC Cancer Agency
FundersNational Cancer InstituteInstitut National Du Cancer
KeywordsLeiomyomatosisMissense mutationGermline mutationGermlinePenetranceMedicineCancer researchCancer syndromeProbandMutationPathologyGeneticsInternal medicineBiologyGeneLeiomyomaPhenotype

Abstract

fetched live from OpenAlex

BACKGROUND: Hereditary leiomyomatosis and renal cell cancer (HLRCC) is an autosomal dominant disorder predisposing humans to cutaneous and uterine leiomyomas; in 20% of affected families, type 2 papillary renal cell cancers (PRCCII) also occur with aggressive course and poor prognosis. HLRCC results from heterozygous germline mutations in the tumour suppressor fumarate hydratase (FH) gene. METHODS: As part of the French National Cancer Institute (INCa) 'Inherited predispositions to kidney cancer' network, sequence analysis and a functional study of FH were preformed in 56 families with clinically proven or suspected HLRCC and in 23 patients with isolated PRCCII (5 familial and 18 sporadic). RESULTS: The study identified 32 different germline FH mutations (15 missense, 6 frameshifts, 4 nonsense, 1 deletion/insertion, 5 splice site, and 1 complete deletion) in 40/56 (71.4%) families with proven or suspected HLRCC and in 4/23 (17.4%) probands with PRCCII alone, including 2 sporadic cases. 21 of these were novel and all were demonstrated as deleterious by significant reduction of FH enzymatic activity. In addition, 5 asymptomatic parents in 3 families were confirmed as carrying disease-causing mutations. CONCLUSIONS: This study identified and characterised 21 novel FH mutations and demonstrated that PRCCII can be the only one manifestation of HLRCC. Due to the incomplete penetrance of HLRCC, the authors propose to extend the FH mutation analysis to every patient with PRCCII occurring before 40 years of age or when renal tumour harbours characteristic histologic features, in order to discover previously ignored HLRCC affected families.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score0.619

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.225
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations142
Published2011
Admission routes1
Has abstractyes

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