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Record W1965542761 · doi:10.1139/z04-018

Genetic diversity and management of Nearctic rock ptarmigan (<i>Lagopus mutus</i>)

2004· article· en· W1965542761 on OpenAlexvenueaboutno aff
Karen Holder, Robert Montgomerie, Vicki L. Friesen

Bibliographic record

VenueCanadian Journal of Zoology · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
Fundersnot available
KeywordsLagopusSubspeciesBiologyZoologyArctic foxArcticEcologyEvolutionary biology

Abstract

fetched live from OpenAlex

Though the rock ptarmigan, Lagopus mutus (Montin, 1776), is a relatively common breeding bird in arctic regions worldwide, several Nearctic insular populations have become extinct or threatened in the past 250 years. In this study, we use patterns of DNA sequence variation in the mitochondrial control region and a nuclear intron (GAPDH) to reexamine the evolutionary history of Nearctic rock ptarmigan populations as a basis for conservation and management. The extent of genetic diversity within currently recognized subspecies varies widely, with many nonmigratory insular subspecies genetically invariant and continental subspecies moderately diverse. Our analyses suggest at least six evolutionarily significant units (ESUs) in the Nearctic and Iceland, four of which correspond to recognized subspecies: Lagopus mutus evermanni (Elliot, 1896) on Attu I., Alaska, Lagopus mutus welchi (Brewster, 1885) on Newfoundland, Lagopus mutus rupestris (Gmelin, 1789) in the Canadian Arctic, and Lagopus mutus islandorum (Faber, 1822) on Iceland. A fifth ESU comprises three central Aleutian subspecies. The remaining subspecies of the Aleutian archipelago, along with Lagopus mutus nelsoni (Stejneger, 1884) of mainland Alaska and Lagopus mutus captus (Peters, 1934) of Ellesmere I., Nunavut, constitute a sixth ESU, which we further subdivide into three management units based on patterns of genetic substructuring and geographic barriers to immigration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.030
Threshold uncertainty score0.060

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.196
Teacher spread0.186 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2004
Admission routes2
Has abstractyes

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