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Record W1968550067 · doi:10.1264/jsme2.me09178

Culturability and Survival of Marine, Freshwater and Clinical Pseudomonas aeruginosa

2010· article· en· W1968550067 on OpenAlexaff
Nurul H. Khan, Mahbuba Ahsan, William D. Taylor, Kazuhiro Kogure

Bibliographic record

VenueMicrobes and Environments · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial biofilms and quorum sensing
Canadian institutionsUniversity of Waterloo
FundersUniversity of TokyoMinistry of Education, Culture, Sports, Science and Technology
KeywordsPseudomonas aeruginosaBiologyMicrobiologyEcologyBacteriaGenetics

Abstract

fetched live from OpenAlex

Genetic typing of Pseudomonas aeruginosa isolated from the open ocean has revealed that marine strains form unique clusters. To clarify whether this genetic variation reflects differences in pattern of culturability and survival, a marine strain was compared with a freshwater strain and a clinical strain in microcosms with different levels of NaCl (0 to 7% [w/v]), pH (4.0 to 9.0) and temperature (-20, 0, 4, 25 and 37°C) in both artificial seawater (ASW) and distilled water (DW). The viable but non-culturable (VBNC) state of P. aeruginosa was also monitored. The marine strain 1200 grew better at high NaCl and pH, whereas the freshwater strain 1030 did better at 0 to 3% NaCl and a pH of less than 7.0. The clinical strain 1564 grew best at neutral pH and 0% NaCl. No significant differences were observed among the strains in culturability at different temperatures. Like other bacteria, P. aeruginosa enters a VBNC state under stressful conditions. The marine P. aeruginosa isolate exhibits a unique pattern of culturability and survival which demonstrates a physiological adaptation to the ocean environment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.476
Threshold uncertainty score0.315

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.229
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations48
Published2010
Admission routes1
Has abstractyes

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