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Record W1970973118 · doi:10.1101/sqb.2012.77.014886

A Tale of Two Systems: Peptide Ligand-Receptor Pairs in Plant Development

2012· review· en· W1970973118 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCold Spring Harbor Symposia on Quantitative Biology · 2012
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Reproductive Biology
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaGordon and Betty Moore FoundationPrecursory Research for Embryonic Science and TechnologyHoward Hughes Medical InstituteNational Science Foundation
KeywordsReceptorSignal transductionPeptideBiologyCell biologyLigand (biochemistry)Cell surface receptorIntracellularKinaseBiochemistry

Abstract

fetched live from OpenAlex

Plants have developed intercellular signaling systems that use secreted peptides and plasma membrane-localized receptor-like kinases (RLKs). Although there has been little experimental evidence linking specific peptide ligands to receptors, recent studies of several ligand-receptor pairs have revealed their increasingly important roles in cell-cell communications during plant development. In this review, we focus on two specific families of plant peptides: the CLAVATA3/ENDOSPERM SURROUNDING REGION (CLE) peptide family and the EPIDERMAL PATTERING FACTOR (EPF) family, along with their corresponding RLKs. We discuss how these two unrelated peptide-mediated signaling systems control plant cell fate and development using similar receptor kinases as well as the mechanisms for how these peptide ligand-receptor pairs precisely regulate various distinct aspects of plant development at the level of ligand-receptor recognition and signal transduction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.987
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.315
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it