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Record W1971779711 · doi:10.1111/gtc.12034

Over‐expression of <scp>ATR</scp> causes autophagic cell death

2013· article· en· W1971779711 on OpenAlexaff
Chihiro Mori, Yoshihiro Yamaguchi, Mika Teranishi, Takako Takanami, Takahiro Nagase, Shin-ichiro Kanno, Akira Yasui, Atsushi Higashitani

Bibliographic record

VenueGenes to Cells · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEndoplasmic Reticulum Stress and Disease
Canadian institutionsInstitute of Aging
FundersJapan Society for the Promotion of ScienceJohns Hopkins University
KeywordsVacuolizationBiologyCell biologyAutophagyProgrammed cell deathKinaseViability assayMolecular biologyCellBiochemistryApoptosis

Abstract

fetched live from OpenAlex

ATR is highly conserved in all eukaryotes and functions as a cell‐cycle checkpoint kinase to stabilize the nuclear genome. In addition, knockout mouse models indicate that ATR is essential for viability. Here, it is shown that moderate overproduction of ATR , but not of the other phosphatidylinositol 3′ kinase‐related kinases, ataxia‐telangiectasia‐mutated, m TOR and SMG ‐1, and a downstream target p53, resulted in cell death. ATR over‐expression induced cellular vacuolization from 12 to 48 h after transfection, before cell death progression. A series of deletion analyses showed that overproduction of the N ‐terminal HEAT repeat segments of ATR was sufficient for the induction of the vacuolization. Moreover, post‐transcriptional modification of LC 3, a marker of autophagy, and autophagosomes with double membranes were evident in ATR ‐overproducing cells. The vacuolization was also suppressed in autophagy‐deficient MCF 7 cells. In addition, both cellular vacuolization and cell death were reduced by inhibition of R as activity using farnesyl thiosalicylic acid. Conversely, neither inhibition of m TOR nor activation of the checkpoint system could be observed in the vacuolated cells. These results suggest that the R as signaling pathway is involved in the autophagic response caused by ATR overproduction, and tight regulation of ATR protein expression is crucial for cell viability.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.614

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.224
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2013
Admission routes1
Has abstractyes

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