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Record W1980072626 · doi:10.4161/psb.2.1.3645

A Novel Function of the 26S Proteasome in Repressing Class-1<i>KNOX</i>Genes During Leaf Development

2007· article· en· W1980072626 on OpenAlexaff
Weihua Huang, Hai Huang

Bibliographic record

VenuePlant Signaling & Behavior · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicUbiquitin and proteasome pathways
Canadian institutionsInstitute for Biological Sciences
Fundersnot available
KeywordsBiologyPrimordiumProteasomeMeristemHomeoboxArabidopsisOrganogenesisEctopic expressionGeneCell biologyPsychological repressionFunction (biology)AbscissionProtein subunitBotanyGeneticsGene expressionMutant

Abstract

fetched live from OpenAlex

Leaf organogenesis occurs within the peripheral zone of the shoot apical meristem (SAM). It has been known that several members of the class-1 KNOTTED1-like homeobox (KNOX) genes are expressed in the SAM, and their expression must be prevented during leaf primordium initiation and subsequent leaf development. A number of regulators that repress class-1 KNOX genes have been identified, and characterizations of these regulators greatly improved our knowledge of the genetic basis of leaf organogenesis. We have recently reported that the proteolytic function of the Arabidopsis 26S proteasome is involved in specifying leaf adaxial identity during leaf development, by characterizations of mutants defective in genes encoding several 26S proteasome subunits. Here we demonstrate that in addition to the role in leaf polarity establishment, the 26S proteasome also participates in repression of class-1 KNOX genes during leaf development. We show that loss of functions in RPN8a and RPT2a, two 26S proteasome subunit genes, resulted in leaves that produce ectopic outgrowths on the abaxial side of blades. These outgrowths were accompanied by the ectopic expression of several class-1 KNOX genes. These results indicate that the 26S proteasome is important in repressing class-1 KNOX genes and its function may be required until later leaf developmental stages.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.546

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.244
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2007
Admission routes1
Has abstractyes

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