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Record W1982084523 · doi:10.1139/w09-034

Comparison of media used to evaluate<i>Rhizobium leguminosarum</i>bivar<i>viciae</i>for phosphate-solubilizing ability

2009· article· en· W1982084523 on OpenAlexaffvenue
Jia Xie, J. Diane Knight, Mary Leggett

Bibliographic record

VenueCanadian Journal of Microbiology · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLegume Nitrogen Fixing Symbiosis
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsMannitolRhizobium leguminosarumPhosphateYeast extractFood scienceLiquid mediumMicrobiologyChemistryBiologyChromatographyBiochemistryBacteriaFermentationRhizobiaceae

Abstract

fetched live from OpenAlex

Rhizobium leguminosarum is well known for its ability to fix nitrogen (N). In addition, its capacity to solubilize phosphate (Ph) has been receiving attention in recent years. Our ultimate objective was to select a R. leguminosarum bv. viciae isolate with superior Ph-solubilizing ability. The first step was to identify a culture medium that is sensitive and effective in identifying the ability of R. leguminosarum bv. viciae isolates to solubilize Ph. Thirty isolates were evaluated for Ph solubilization in broth and on solid formulations of three media: yeast mannitol extract (YEM), National Botanical Research Institute phosphate nutrient medium (MNBRI), and Pikovskaya phosphate medium (PVK). All media contained 5 g/L CaHPO4 as the only phosphorus (P) source. All 30 isolates increased the Ph concentration in liquid cultures, but the amount of Ph released into solution by individual isolates varied from one medium to another. In contrast, only a subset of the 30 isolates solubilized Ph on the solid cultures. Furthermore, some of the isolates that were able to solubilize Ph were only able to do so on a single medium. Regression analysis revealed no relationship between the Ph concentration in the liquid media and the zones of clearing on the solid media (p > 0.05). Although the pH of all of the liquid media dropped after 12 days of growth of the isolates, a relationship between Ph concentration and pH existed only for the MNBRI medium (r2 = 0.485, p < 0.001). Increasing the amount of N in the MNBRI medium from 0.1 g/L of (NH4)2SO4 to 0.5 g/L of (NH4)2SO4 did not affect the amount of Ph in solution, but it profoundly reduced the survival of the R. leguminosarum by approximately 50-fold. Consequently, the surviving bacteria were either more efficient at solubilizing Ph in the high N media or organic acids released from the lysis of the dead cells solubilized the CaHPO4 source.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.276
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2009
Admission routes2
Has abstractyes

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