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Record W1982101816 · doi:10.1158/1538-7445.am2012-1397

Abstract 1397: A novel ligand-independent Flt3 allele drives RANKL expression in a murine model of B-precursor acute lymphoblastic leukemia with CNS dissemination

2012· article· en· W1982101816 on OpenAlexaff
Eniko Papp, Radia Marie Johnson, Daniele Merico, Pingzhao Hu, Ildiko Grandal, Cynthia J. Guidos, Jayne S. Danska

Bibliographic record

VenueCancer Research · 2012
Typearticle
Languageen
FieldMedicine
TopicAcute Lymphoblastic Leukemia research
Canadian institutionsOntario GenomicsHospital for Sick ChildrenUniversity of Toronto
Fundersnot available
KeywordsBiologyProgenitor cellCancer researchHaematopoiesisReceptor tyrosine kinaseTyrosine kinasePrecursor cellMolecular biologySignal transductionStem cellCell biologyGeneticsIn vitro

Abstract

fetched live from OpenAlex

Abstract Survival rates for pediatric acute lymphoblastic leukemia (ALL) have improved dramatically, but outcomes for the 15% who relapse and for adults with ALL remain poor. Up to 40% of pediatric ALL patients require central nervous system (CNS) prophylaxis treatments that pose significant risk. We previously showed that p53−/− Rag-2−/− Prkdcscid;scid triple mutant (TM) mice spontaneously develop early B-cell ALL that disseminates to the CNS. We used this model to investigate molecular mechanisms that drive CNS dissemination of leukemic B-cells. Array comparative genomic hybridization revealed that TM ALLs have recurrent polyploidy or partial gains of telomeric chromosome 5 containing the Fms-like tyrosine kinase 3 (Flt3) locus. FLT3 is a type III receptor tyrosine kinase normally expressed on multi-potent hematopoietic progenitors. Small molecule FLT3 inhibitors abrogated proliferation of leukemic TM blasts in vitro, suggesting that Flt3 is a leukemic driver. During normal B-cell development, Flt3 is repressed by the PAX5 transcription factor, which also induces expression of B-lineage genes. Although TM ALLs expressed many genes indicative of B-lineage commitment, they ectopically over-expressed a truncated form of Flt3 (trFlt3) driven by an endogenous retrovirus long terminal repeat. The trFlt3 allele lacked most of the extracellular ligand-binding domain, but retained the trans-membrane region. Retroviral transduction of trFlt3 into BaF3 hematopoietic progenitor cells rendered their growth independent of interleukin-3. Phospho-flow cytometric profiling studies demonstrated that the signaling properties of trFLT3 are similar to those of FLT3-ITD, but are distinct from ligand-dependent FLT3 signaling. Thus, genomic rearrangements make Flt3 resistant to PAX5 repression and allow ectopic ligand-independent FLT3 signaling in TM B-ALL. Gene set enrichment analysis was used to identify genes downstream of Flt3 as potential drivers of B-ALL CNS dissemination. TM B-ALL blasts (but not murine B-ALL blasts lacking Flt3 expression) expressed RANKL, a key regulator of osteoclast differentiation and normal B-cell development. Cell surface expression of RANKL was absolutely correlated with the presence of trFLT3 protein, and RANKL cell surface expression was down-regulated by FLT3 inhibitors, suggesting that RANKL expression was controlled by trFLT3 signaling. We also found that interleukin-7, an important cytokine in B-cell development, up-regulates RANKL in normal pro-B cells. We are currently investigating if a RANKL antagonist can inhibit CNS dissemination of TM B-ALL expressing RANKL. Our studies have identified a novel Flt3 mutant allele with unusual signaling properties as a leukemic driver of early B-ALL, and provide a model for in vivo testing of the role of RANKL in mediating CNS dissemination of leukemic B-cell progenitors. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 103rd Annual Meeting of the American Association for Cancer Research; 2012 Mar 31-Apr 4; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2012;72(8 Suppl):Abstract nr 1397. doi:1538-7445.AM2012-1397

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0050.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.369
Teacher spread0.328 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes1
Has abstractyes

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