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How consistent are trait data between sources? A quantitative assessment

2013· article· en· W1988374369 on OpenAlexaffabout
Jay M. Fitzsimmons

Bibliographic record

VenueOikos · 2013
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsEnvironment and Climate Change Canada
Fundersnot available
KeywordsTraitQuantitative trait locusBiologyEcologyWingspanField (mathematics)NicheComputer scienceMathematics

Abstract

fetched live from OpenAlex

The use of species’ traits is increasing in ecological research. Many studies obtain trait data from a single source, implicitly assuming the accuracy of these data. I critically evaluate this assumption by measuring agreement among sources for trait data. I evaluate inter‐source agreement for 22 traits (anatomical, behavioural, life‐history and niche‐related) among five authoritative data sources (two field guides, two atlases and one online resource) for 263 Canadian butterfly species. This represents the first quantitative comparison of trait data among field guides or atlases. Traits varied considerably in their agreement among sources. Some traits such as wingspan and overwinter stage were fairly consistent among sources, whereas other traits such as habitat breadth were remarkably inconsistent among sources. These findings call into question the reliability of research that relies on a single source for trait data. I offer several recommendations for how trait researchers can account for inter‐source variation in trait data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.279
metaresearch head score (Gemma)0.590
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.721
Threshold uncertainty score0.890

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2790.590
Meta-epidemiology (narrow)0.0010.002
Meta-epidemiology (broad)0.0020.003
Bibliometrics0.0140.018
Science and technology studies0.0030.007
Scholarly communication0.0100.011
Open science0.0040.007
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.123
GPT teacher head0.314
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designObservational
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2013
Admission routes2
Has abstractyes

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