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Record W1988839985 · doi:10.1002/biot.200800331

Scale‐up of controlled‐shear affinity filtration using computational fluid dynamics

2009· article· en· W1988839985 on OpenAlexaff
Patrick Francis, Charles A. Haynes

Bibliographic record

VenueBiotechnology Journal · 2009
Typearticle
Languageen
FieldEngineering
TopicMicrofluidic and Bio-sensing Technologies
Canadian institutionsCanada's Michael Smith Genome Sciences CentreUniversity of British Columbia
Fundersnot available
KeywordsComputational fluid dynamicsFiltration (mathematics)BioprocessBioreactorChromatographyRotor (electric)SCALE-UPFluid dynamicsTurbulenceScale (ratio)Cross-flow filtrationMechanicsChemistryMaterials scienceMembraneBiological systemMechanical engineeringEngineeringChemical engineeringPhysicsMathematicsBiology

Abstract

fetched live from OpenAlex

Controlled shear affinity filtration (CSAF) is an integrated bioprocess that positions a contoured rotor above a membrane affinity chromatography column to permit the capture and purification of a secreted protein product directly from cell culture. Here, computational fluid dynamics (CFD) simulations previously used on a laboratory-scale unit (Francis et al., Biotechnol. Bioeng. 2005, 95, 1207-1217) are extended to study the fluid hydrodynamics and expected filter performance of the CSAF device for rotor sizes up to 140 cm in radius. We show that the fluid hydrodynamics within the rotor chamber of larger-scale CSAF units are complex and include turbulent boundary layers; thus, CFD likely provides the only reliable route to CSAF scale-up. We then model design improvements that will be required for CSAF scale-up to permit processing of industrial feedstock. The result is the in silico design of a preparative CSAF device with an optimized rotor 140 cm in radius. The scaled up device has an effective filtration area of 5.93 m(2), which should allow for complete processing in ca. 2 h of 1000 L of culture harvested from either a perfusion, fed-batch or batch bioreactor. Finally, a novel method for the parallelization of CSAF units is presented for use in bioprocessing operations larger than 1000 L.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.225
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2009
Admission routes1
Has abstractyes

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