An Atoms in Molecules and Electron Localization Function Computational Study on the Molecular Structure of the 6-Tricyclo[3.2.1.0<sup>2,4</sup>]octyl Cation
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Bibliographic record
Abstract
The structure of 6-tricyclo[3.2.1.0 2,4 ]octyl cation 1 was optimized at HF, Becke3PW91, Becke3LYP, MP2, and MP2(full) levels with the 6-311G(d,p) basis set. Becke3PW91 and MP2(full) yielded similar values for the geometrical parameters of optimized 1 . When the C4−C6 distance was changed incrementally through the range 1.40−2.32 Å at the Becke3PW91/6-311G(d,p) level, there was no discontinuity in the total energy and the geometrical parameters of the cyclopropyl group underwent marked changes. AIM (the theory of atoms in molecules) and ELF (electron localization function) analyses were carried out to investigate the molecular structure of 1 . No bond path was found between C4 and C6 so 1 is a classical cation without pentacoordinated carbon atoms. Only when the C4−C6 distance was fixed in the range of 1.50−1.62 Å does 1 become a pentacoordinate (nonclassical) species in which C4 is connected to C2, C3, C5, C6, and H13 with bond paths. On the other hand, when the 6-tricyclo[3.2.1.0 2,4 ]octyl cation was substituted with Li and BeH groups at C4 and C5, the optimized equilibrium species exhibted pentacoordinate carbons at C4. Compared with the C1−C2 bond that we take as a normal single bond, the bonds between C4 and C2, C3, C5 are weak, as evidenced by reduced densities ρ ( r ), significantly smaller ∇ 2 ρ ( r ) values, and large ellipticities at the bond critical points (BCPs). The delocalization indices (DIs) the first application of a DI analysis in the study of carbocations for these C−C bonds ranged between 0.733 and 0.860, smaller than unity. The DI between C4 and C6 is 0.634, suggesting that there is a significant degree of homoconjugation between C4 and C6. For polycyclic species such as 1, it appears that a delocalization index of approximately 0.7 and an internuclear distance of 1.6 Å are required for a bond path to materialize between remote carbons. In an ELF analysis we found a small disynaptic basin V(C4,C6) between C4 and C6 that correlated with the existence of a (3, −1) critical point in −∇ 2 ρ ( r ). The properties of ELF disynaptic basins around C4 and a contribution analysis showed a high degree of delocalization at this center.
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
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Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it