MétaCan
Menu
Back to cohort

Differential activation and suppression of potato defence responses by <i>Phytophthora infestans</i> isolates representing US‐1 and US‐8 genotypes

2008· article· en· W1995793476 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenuePlant Pathology · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsPhytophthora infestansInoculationBiologyBlightCultivarHorticultureGenotypeSolanaceaeGeneBotanyGenetics

Abstract

fetched live from OpenAlex

Defence responses were investigated in two potato cultivars with different levels of resistance to late blight, Russet Burbank (susceptible) and Kennebec (moderately resistant), after inoculation with single isolates representing Phytophthora infestans genotypes US‐1 (previously predominant, mildly aggressive) and US‐8 (currently predominant, highly aggressive). The accumulation of brown lignin‐like materials and an increase in the cell wall affinity to trypan blue 24 h after inoculation were observed in cv. Kennebec inoculated with US‐1, but not in Kennebec inoculated with US‐8, or cv. Russet Burbank inoculated with either US‐1 or US‐8. The expression of PAL‐1, HMG‐2, PR‐1 and PR‐5 was investigated in three leaf strata (local, proximal and distal) and at different times after inoculation, using SYBR real‐time RT‐PCR. The activation of these defence‐related genes was affected not only by P. infestans genotype, but also by the potato cultivar and the proximity to the inoculation site. These genes were up‐regulated earlier in Kennebec than in Russet Burbank and in response to US‐1 than to US‐8. Over all, the earliest and strongest up‐regulation of these genes occurred in Kennebec inoculated with US‐1. Furthermore, PAL‐1 and HMG‐2 were down‐regulated at the site of infection while such down‐regulation was not observed for PR‐1 or PR‐5 . In parallel, the accumulation level and location of phenolics and rishitin matched those of PAL‐1 and HMG‐2 transcripts, respectively. These results strongly suggest that changes in either the activation or suppression of defence responses by the pathogen shape the level of susceptibility of potato cultivars to late blight.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.637
Threshold uncertainty score0.210

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.204
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it