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Accurate delineation of biogeographical regions depends on the use of an appropriate distance measure

2008· article· en· W1997072200 on OpenAlexaff
Sara A. Gagné, Raphaël Proulx

Bibliographic record

VenueJournal of Biogeography · 2008
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsCarleton University
Fundersnot available
KeywordsBiogeographyHellinger distanceMeasure (data warehouse)Euclidean distanceCluster analysisInsular biogeographyCluster (spacecraft)EcologyBiologyStatisticsMathematicsComputer scienceData miningArtificial intelligence

Abstract

fetched live from OpenAlex

Abstract The use of analytical techniques to delineate biogeographical regions is becoming increasingly popular. One recent example, Heikinheimo et al . ( Journal of Biogeography , 2007, 34 , 1053–1064 ), applied the k ‐means clustering algorithm to define the biogeography of the European land mammal fauna. However, they used the Euclidean distance measure to cluster grid cells described by species‐occurrence data, which is inappropriate. The Euclidian distance yields misleading results when applied to species‐occurrence data because of the double‐zero problem and the species‐abundance paradox. We repeat their analysis using the Hellinger distance, a measure appropriate for species‐occurrence data and which has been shown to outperform other such measures. Our results differ substantially from those presented by Heikinheimo et al. We argue that the rigorous application of appropriate statistical techniques is of crucial concern within conservation biogeography.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.269

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.230
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2008
Admission routes1
Has abstractyes

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