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Record W1999891036 · doi:10.2135/cropsci2003.1510

RAPD Analysis of 54 North American Flax Cultivars

2003· article· en· W1999891036 on OpenAlexaffabout
Yong‐Bi Fu, G. G. Rowland, Scott Duguid, K. W. Richards

Bibliographic record

VenueCrop Science · 2003
Typearticle
Languageen
FieldMedicine
TopicPhytoestrogen effects and research
Canadian institutionsUniversity of SaskatchewanAgriculture and Agri-Food Canada
Fundersnot available
KeywordsRAPDBiologyCultivarGermplasmGenetic diversityLinumGenetic variationGenetic distanceBotanyGenetic markerGeneticsHorticultureGenePopulation

Abstract

fetched live from OpenAlex

Broadening the genetic base of linseed flax ( Linum usitatissimum L.) cultivars to sustain improvement requires assessment of genetic diversity available in flax germplasm. The objective of this study was to analyze the genetic variation, genetic erosion, and genetic relationship of 54 North American flax cultivars by means of random amplified polymorphic DNA (RAPD) markers. The variations observed at the 84 polymorphic RAPD loci were relatively moderate with respect to primer, polymorphism, and cultivar. The proportions of fixed recessive RAPD loci for all the cultivars ranged from 36.9 to 59.2%, with an average of 45.3%. Genetic erosion in the century‐long breeding programs was not statistically significant as revealed by the proportion of fixed recessive RAPD loci, but the trend appeared to be that 2.5% of variable RAPD loci were fixed over 100 yr. While some variable RAPD loci were fixed over different breeding periods, the genetic relatedness of the cultivars was reduced in the Canadian programs, but not in the U.S. programs. The genetic relationships of the cultivars inferred via RAPD similarity were largely consistent with known, but incomplete, pedigrees. Both Canadian and U.S. cultivars were intermixed in various groups without distinct separation and several genetically distinct cultivars (i.e., NDR 52, Vimy, Rocket, Norland, Dakota, and Marine) were identified.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.025
Threshold uncertainty score0.049

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.352
Teacher spread0.331 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations71
Published2003
Admission routes2
Has abstractyes

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