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Record W2004500024 · doi:10.1007/s11606-012-2031-7

Chapter 9: Options for Summarizing Medical Test Performance in the Absence of a “Gold Standard”

2012· article· en· W2004500024 on OpenAlexaff
Thomas A Trikalinos, Cynthia Balion

Bibliographic record

VenueJournal of General Internal Medicine · 2012
Typearticle
Languageen
FieldMathematics
TopicStatistical Methods in Clinical Trials
Canadian institutionsMcMaster UniversityHamilton General Hospital
FundersAgency for Healthcare Research and QualityU.S. Department of Health and Human Services
KeywordsGold standard (test)Test (biology)MedicineIndex (typography)ImperfectSensitivity (control systems)StatisticsComputer scienceMathematicsInternal medicine

Abstract

fetched live from OpenAlex

The classical paradigm for evaluating test performance compares the results of an index test with a reference test. When the reference test does not mirror the "truth" adequately well (e.g. is an "imperfect" reference standard), the typical ("naïve") estimates of sensitivity and specificity are biased. One has at least four options when performing a systematic review of test performance when the reference standard is "imperfect": (a) to forgo the classical paradigm and assess the index test's ability to predict patient relevant outcomes instead of test accuracy (i.e., treat the index test as a predictive instrument); (b) to assess whether the results of the two tests (index and reference) agree or disagree (i.e., treat them as two alternative measurement methods); (c) to calculate "naïve" estimates of the index test's sensitivity and specificity from each study included in the review and discuss in which direction they are biased; (d) mathematically adjust the "naïve" estimates of sensitivity and specificity of the index test to account for the imperfect reference standard. We discuss these options and illustrate some of them through examples.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.178
metaresearch head score (Gemma)0.490
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.822
Threshold uncertainty score0.942

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1780.490
Meta-epidemiology (narrow)0.0030.002
Meta-epidemiology (broad)0.0030.005
Bibliometrics0.0140.015
Science and technology studies0.0020.008
Scholarly communication0.0090.013
Open science0.0080.006
Research integrity0.0050.007
Insufficient payload (model declined to judge)0.0180.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.435
GPT teacher head0.553
Teacher spread0.118 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designTheoretical or conceptual
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations58
Published2012
Admission routes1
Has abstractyes

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