MétaCan
Menu
Back to cohort
Record W2006053504 · doi:10.3354/ame01159

Bacterial involvement in determining domoic acid levels in Pseudo-nitzschia multiseries cultures

2007· article· en· W2006053504 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueAquatic Microbial Ecology · 2007
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine Toxins and Detection Methods
Canadian institutionsFisheries and Oceans CanadaBedford Institute of Oceanography
Fundersnot available
KeywordsDomoic acidAxenicDiatomBiologyAxenic cultureFood scienceMicrobiologyBotanyBiochemistryBacteria

Abstract

fetched live from OpenAlex

This study examining factors contributing to the production or elimination of domoic acid (DA) in cultures of Pseudo-nitzschia multiseries showed that in axenic cultures doubling the silicate concentrations increased growth, but not DA levels. DA concentration for axenic cultures was increased by the addition of gluconolactone (GlcA), especially in cultures with increased silicon. In non-axenic cultures, there were similar increases in growth with increased silicon, but a reduction of DA production in the presence of GlcA. Detailed examinations confirmed these findings and also showed that in non-axenic cultures, glucose alone resulted in a reduction of DA while a combination of glucose with gluconolactone resulted in a complete elimination of DA. Subsequent trials with axenic P. multiseries cultures showed that additions of DA or DA plus glucose introduced at the early stationary growth phase and incubated for 5 d had no impact on DA concentrations. In contrast, a 6 d incubation of the associated bacteria separated from the non-axenic diatom cultures showed reductions of added DA concentrations ranging from 46 to 72%, depending upon co-additives. The diatom does not use extracellular DA present in surrounding culture medium whereas bacteria associated with the diatom can utilize DA readily. Reductions in the production of DA by aging P. multiseries cultures appear to be the result of changing balances over time among bacteria associated with the diatom. These data coupled with results from other studies indicate that the amount of DA measured in P. multiseries cultures is a result of competitive interaction, i.e. a function of the diatom's production rate versus the extra-cellular utilization of DA by associated bacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.736
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0060.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.283
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it