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Record W2006509456 · doi:10.1242/jeb.045088

Characterization of mechanisms for Ca2+ and HCO3–/CO32– acquisition for shell formation in embryos of the freshwater common pond snail <i>Lymnaea stagnalis</i>

2010· article· en· W2006509456 on OpenAlexaff
Sue C. Ebanks, Michael J. O’Donnell, Martin Grosell

Bibliographic record

VenueJournal of Experimental Biology · 2010
Typearticle
Languageen
FieldMaterials Science
TopicCalcium Carbonate Crystallization and Inhibition
Canadian institutionsMcMaster University
Fundersnot available
KeywordsLymnaea stagnalisBicarbonateCalciumCalcificationSnailBiophysicsLymnaeaCalcium carbonateCarbonic anhydraseChemistryFreshwater snailCarbonateATPaseBiologyBiochemistryEcologyEnzymeInternal medicine

Abstract

fetched live from OpenAlex

The freshwater common pond snail Lymnaea stagnalis produces embryos that complete direct development, hatching as shell-bearing individuals within 10 days despite relatively low ambient calcium and carbonate availability. This development is impaired by removal of ambient total calcium but not by removal of bicarbonate and/or carbonate. In this study we utilized pharmacological agents to target possible acquisition pathways for both Ca(2+) and accumulation of carbonate in post-metamorphic, shell-laying embryos. Using whole egg mass flux measurements and ion-specific microelectrode analytical techniques, we have demonstrated that carbonic anhydrase-catalyzed hydration of CO(2) is central in the acquisition of both shell-forming ions because it provides the hydrogen ions for an electrogenic vacuolar-type H(+)-ATPase that fuels the uptake of Ca(2+) via voltage-dependent Ca(2+) channels and possibly an electrogenic Ca(2+)/1H(+) exchanger. Additionally, CO(2) hydration provides an endogenous source of HCO(3)(-). Thus, hydration of endogenous CO(2) forms HCO(3)(-) for calcification while hydrogen ions are excreted, contributing to continued Ca(2+) uptake, as well as creating favorable alkaline internal conditions for calcification. The connections between Ca(2+) and HCO(3)(-) acquisition mechanisms that we describe here provide new insight into this efficient, embryonic calcification in freshwater.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.264
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations38
Published2010
Admission routes1
Has abstractyes

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