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Record W2007013500 · doi:10.1094/asbcj-2010-0629-01

Dried Yeast: Impact of Dehydration and Rehydration on Brewing Yeast DNA Integrity

2010· article· en· W2007013500 on OpenAlex
David Jenkins, Chris Powell, Katherine A. Smart

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of the American Society of Brewing Chemists · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFungal and yeast genetics research
Canadian institutionsLallemand (Canada)
FundersBiotechnology and Biological Sciences Research CouncilEngineering and Physical Sciences Research Council
KeywordsBiologyYeastMitochondrial DNAGeneticsBrewingSaccharomyces cerevisiaeBiochemistryGeneFermentation

Abstract

fetched live from OpenAlex

As a consequence of fluidized bed drying, yeast cells may be exposed to a series of physiological stresses, of which the most evident is water loss. Desiccation can lead to cell wall crenellation, cytoplasmic crowding, loss of DNA supercoiling, membrane disruption, phase transitions, and ultimately cell death. Although the dehydrated phenotype has been well characterized, the sequence of events that causes damage to the cell has not been widely reported. Here we investigate the impact of dehydration and rehydration on the stability of the brewing yeast genome, including both the chromosomal and mitochondrial DNA (mtDNA). Analysis of rehydrated and control yeast populations for chromosome length polymorphisms (karyotyping), DNA sequence changes (PCR analysis of interdelta sequences), gross mitochondrial damage (presence of respiratory deficient mutants), and mitochondrial sequence changes (mtDNA RFLP [restriction fragment length polymorphisms]) indicated that the genetic constitution of dried yeast is not affected by the drying process. Active dried yeast (ADY) populations also demonstrated an enhanced tolerance to mutagen challenge (targeted at mtDNA), suggesting that the susceptibility of mtDNA to change is not associated with fluidized bed drying. These results demonstrate that the genetic stability of ADY is comparable to control populations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.311

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.308
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it