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Record W2008975070 · doi:10.1899/05-022.1

Genetic differentiation of<i>Caridina cantonensis</i>(Decapoda:Atyidae) in Hong Kong streams

2005· article· en· W2008975070 on OpenAlexfundno aff
Rita S. W. Yam, David Dudgeon

Bibliographic record

VenueJournal of the North American Benthological Society · 2005
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
FundersHong Kong GovernmentUniversity of Alberta
KeywordsBiologyBiological dispersalPopulationEcologyGene flowShrimpGenetic structureGenetic variationPopulation geneticsZoologyGenetics

Abstract

fetched live from OpenAlex

Caridina cantonensis Yu 1938 is an atyid shrimp that is widespread in southern China, including Hong Kong. It is a fully freshwater species with an abbreviated larval development lacking planktonic stages. The population genetics of C. cantonensis in Hong Kong streams was studied at inter- and intradrainage scales using random amplified polymorphic DNA (RAPD) markers. Shrimps displayed low levels of within-population genetic variation (≤20% of total genotypic variance) but high levels of among-population variation (>50% of total genotypic variance) at both scales. High interdrainage genetic differentiation indicated that dispersal among catchments was limited, whereas high differentiation among populations at the intradrainage scale mainly resulted from natural barriers such as waterfalls. The effect of man-made barriers on population differentiation at the intradrainage scale was less marked than at the interdraineage scale. Levels of gene flow among populations within and among drainage systems were low, the estimated number of effective migrants/generation (Nem) was <0.1, and there was a trend toward relatively fewer alleles and lower heterozygosity in upstream populations than in downstream populations. Genetic differentiation between lowland populations from adjacent drainages was lower than for other pairwise combinations of populations, suggesting that interdrainage dispersal is likely during floods. The genetic structure of C. cantonensis populations in Hong Kong streams indicates that adaptation to local conditions in individual streams or sites within streams probably occurred. At a regional scale, this process might account for the large number of stenotopic species of Caridina in Asia.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.030
Threshold uncertainty score0.319

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.222
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2005
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the North American Benthological SocietySame topicGenetic diversity and population structureFrench-language works237,207