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Record W2010169130 · doi:10.1111/mec.12507

At least some protist species are not ubiquitous

2013· letter· en· W2010169130 on OpenAlexfundno aff
Diego Fontaneto, Joaquín Hortal

Bibliographic record

VenueMolecular Ecology · 2013
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtist diversity and phylogeny
Canadian institutionsnot available
FundersHakai Institute
KeywordsBiologyBiological dispersalBiogeographyProtistEcologyBiodiversityEvolutionary biologyPopulation

Abstract

fetched live from OpenAlex

Body size is one of the main regulators of the ecological characteristics of living organisms, including their biogeography. The 'ubiquity hypothesis' for microorganisms states that they are widely distributed, if not cosmopolitan, due to their small size that allows passive dispersal, in contrast to large organisms that are limited by geographical barriers in their active dispersal. Such idea, summarized in the tenet 'Everything is everywhere, but the environment selects', has driven most of the research in biogeography for microscopic organisms in the last decades, spurring a debate on whether there are fundamental differences in the biogeography of small and large organisms or not (Fenchel & Finlay 2004; Foissner 2008; Hortal 2011). The strong focus on the ubiquity hypothesis may have been often abused to provide a rationale for otherwise descriptive work on the spatial distribution of microscopic organisms; nevertheless, such focus also provides a framework to understand the mechanisms originating and maintaining biodiversity in space. The reliability of the analyses on unknown and understudied organisms is improving, and Heger et al. (2013) is a splendid example on small unicellular eukaryotes of what should be done to overcome the major problems and ambiguities that heated the debate on the ubiquity hypothesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.397
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.198
Teacher spread0.186 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2013
Admission routes1
Has abstractyes

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