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96 
Recognizing cryptic species: investigations into the molecular relatedness and morphological diversity of the species of the red algal genus <i>plocamium</i> (plocamiales, florideophyceae)

2003· article· en· W2010946997 on OpenAlexaff
K. Virginia Lehmkuhl, Gary W. Saunders

Bibliographic record

VenueJournal of Phycology · 2003
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal plant biology
Canadian institutionsUniversity of New BrunswickBamfield Marine Sciences Centre
Fundersnot available
KeywordsBiologyGenusType localityCosmopolitan distributionRibosomal DNASpecies complexDNA barcodingEvolutionary biologyType (biology)ZoologyEcologyPhylogeneticsPhylogenetic treeGeneticsGene

Abstract

fetched live from OpenAlex

Small‐subunit ribosomal DNA (SSU) sequences used in combination with anatomical and morphological data have supported elevation of the Plocamiaceae to ordinal status. The Plocamiales currently includes two genera: the free‐living Plocamium Lamouroux; and the adelphoparasite, Plocamiocolax Setchell. Plocamium includes upwards of 40 species, which are widely distributed throughout the world's oceans. Most species are clearly defined anatomically and biogeographically. In this regard the type species, P. cartilagineum (L.) Dixon (type locality: reportedly Northern Europe), is an exception. Plocamium cartilagineum is considered cosmopolitan in distribution, with individuals varying in size, and in the number and habit of ramuli in their alternating series. We have sequenced the large‐subunit ribosomal DNA (LSU) for representatives of P. cartilagineum from France, Ireland, Norway and Scotland as well as isolates from Australia and the North Pacific. These data indicate that many cryptic species, four within Europe itself, are currently included within the concept of P. cartilagineum. We present molecular, biogeographical, ecological, and morphological/anatomical data characterizing these European forms and provide taxonomic revisions that reflect this diversity within P. cartilagineum.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.184
Teacher spread0.164 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2003
Admission routes1
Has abstractyes

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