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Record W2011187423 · doi:10.1139/cjb-2013-0036

Molecular evidence for reticulate speciation in <i>Astragalus</i> (Fabaceae) as revealed by a case study from sect. <i>Dissitiflori</i>

2013· article· en· W2011187423 on OpenAlexvenueno aff
László Bartha, Nicolae Dragoş, Attila Molnár V., Gábor Sramkó

Bibliographic record

VenueBotany · 2013
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Ecology and Taxonomy Studies
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyReticulateAstragalusPhylogenetic treeNdhFFabaceaeReticulate evolutionCoalescent theoryEvolutionary biologyLineage (genetic)TaxonPhylogeneticsPlant evolutionBotanyGenetic algorithmChloroplast DNAGeneticsGenomeGene

Abstract

fetched live from OpenAlex

Although hybridization has long been recognized as a major force driving speciation in land plants, it has not yet been evidenced in Astragalus, the largest angiosperm genus. Here, we reveal the possible contribution of hybridization to speciation in Astragalus by employing cloning of the nrDNA ITS region and sampling three plastid regions (ycf1, ndhF–rpl32, and rpl32–trnL) in taxa belonging to sect. Dissitiflori. Phylogenetic network and tree analyses uncovered various levels of intra-individual and intraspecific polymorphism of ITS in most of the taxa investigated. Two distantly related ribotype groups were found to be shared by the closely related polyploids Astragalus pallescens M.Bieb., Astragalus peterfii Jáv., and Astragalus pseudoglaucus Klokov suggesting ancient hybridization followed by incomplete lineage sorting (i.e., shared ancestral polymorphism) in nrDNA ITS. Reticulation is also invoked as an underlying evolutionary process behind the statistically highly supported incongruent placement of A. pseudoglaucus and Astragalus vesicarius subsp. pastellianus (Pollini) Arcang. in nuclear versus plastid phylogenies. The phylogenetic results also shed light on taxonomic controversies in the section, such as the false synonimization of A. peterfii under A. vesicarius s.l. Our results provide evidence for the (at least past) existence of speciation processes driven by hybridization in Astragalus.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.248
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2013
Admission routes1
Has abstractyes

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