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Record W2013051798 · doi:10.1524/zpch.2008.5389

Mechanisms of Double Proton Transfer. Theory and Applications

2008· article· en· W2013051798 on OpenAlexaff
Zorka Smedarchina, Willem Siebrand, Antonio Fernández‐Ramos, Rubén Meana‐Pañeda

Bibliographic record

VenueZeitschrift für Physikalische Chemie · 2008
Typearticle
Languageen
FieldChemistry
TopicPhotochemistry and Electron Transfer Studies
Canadian institutionsNational Research Council Canada
FundersXunta de GaliciaVedecká Grantová Agentúra MŠVVaŠ SR a SAV
KeywordsProtonDimerTransfer (computing)Formic acidChemical physicsMolecular dynamicsChemistryPotential energy surfaceMoleculeField (mathematics)Hydrogen bondBenzoic acidStatistical physicsComputational chemistryMolecular physicsPhysicsQuantum mechanicsNuclear magnetic resonanceMathematicsComputer science

Abstract

fetched live from OpenAlex

Abstract An analytical two-dimensional (2D) potential-energy surface based on two equal hydrogen bonds coupled by a correlation term, recently introduced [J. Chem. Phys. 127 (2007) 174513] to describe the dynamics of double proton transfer, is reviewed and generalized. It is then applied to the evaluation of proton transfer dynamics in a number of realistic systems, namely several molecules and dimers that exhibit various degrees of correlation between the motions of the two protons. The three parameters required to generate this 2D potential are derived from electronic structure and force field calculations, such that they include implicitly the effect of coupled skeletal modes. It follows that explicit introduction of such coupled modes is not required to obtain the basic relations that define the stationary points of the 2D surface, and thereby the reaction mechanism. Based on these relations, a detailed analysis is reported of a variety of systems exhibiting double proton transfer, including, apart from previously investigated porphine and porphycene, representing weak correlation, and the formic and benzoic acid dimers, representing strong correlation, two newly investigated systems which shed light on the hitherto not represented intermediate correlation category, namely naphthazarin, and the 4-bromopyrazole dimer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.327
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.251
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations29
Published2008
Admission routes1
Has abstractyes

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