Induction of human airway epithelial to mesenchymal transition upon rhinovirus infection
Bibliographic record
Abstract
Structural changes of the airway, collectively referred to as airway remodeling are believed to be the underlying cause of the airway hyperresponsiveness that is characteristic of asthma. Airway remodeling is characterized by thickening of the subepithelial membrane, goblet cell hyperplasia, angiogenesis, increased smooth muscle mass, and epithelial fragility. Thickening of the subepithelial membrane, due to increased deposition of matrix proteins by fibroblasts/myofibroblasts, has been observed in children even prior to the formal diagnosis of asthma. Recent data have shown that young children who experience episodes of human rhinovirus (HRV)-induced wheezing in early childhood are at increased risk of subsequently developing asthma. The primary site of infection of HRV is the airway epithelium. Recent evidence suggests that the molecular reprogramming of epithelial cells through a process called epithelial to mesenchymal transition (EMT) may contribute to increases in fibroblast/myofibroblast in the asthmatic airway. Therefore, we hypothesize that HRV infection plays a role in early airway remodeling by triggering EMT to produce fibroblasts/myofibroblasts that cause thickening of the subepithelial membrane by depositing matrix proteins. The BEAS-2B human bronchial epithelial cell line was grown in 6-well plates in bronchial epithelial growth medium (BEGM). Prior to experiments, cells were grown for 24 h in BEGM from which hydrocortisone was removed. Cells were exposed to medium (control), or purified HRV-16 alone or in the presence of various growth factors for 120 hours with media and growth factor replacement at 48 and 96 hours. Cell lysates were collected and then analyzed by western blot for protein expression of epithelial and mesenchymal markers. BEAS-2B cells that were infected with HRV in the presence of epidermal growth factor (EGF) showed decreased expression of the epithelial marker E-cadherin, and increased expression of the mesenchymal marker vimentin. HRV infection, particularly in combination with EGF causes changes characteristic of EMT. I will confirm and extend these observations by looking at other epithelial and mesenchymal markers and looking for phenotypic changes. Future studies will examine the mechanisms underlying HRV induced EMT using siRNA and pharmacologic approaches.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".