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Record W2017109689 · doi:10.1517/17425255.2011.585968

Have physiologically-based pharmacokinetic models delivered?

2011· article· en· W2017109689 on OpenAlexafffund
Andrea N. Edginton, Ghanashyam Joshi

Bibliographic record

VenueExpert Opinion on Drug Metabolism & Toxicology · 2011
Typearticle
Languageen
FieldPharmacology, Toxicology and Pharmaceutics
TopicPharmacogenetics and Drug Metabolism
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of CanadaHeartland Health Research AllianceU.S. Environmental Protection Agency
KeywordsPhysiologically based pharmacokinetic modellingIn silicoPharmacokineticsDrug developmentDrugHuman healthComputational biologyComputer scienceBiochemical engineeringPharmacologyRisk analysis (engineering)MedicineBiologyEngineering

Abstract

fetched live from OpenAlex

The application of in silico methods for predicting internal dosimetry of a compound has gained attention in the past few years from academia, government and industry. One such method based on both compound- and organism-specific information is physiologically-based pharmacokinetic (PBPK) modeling. Numerous promises surrounding the potential of PBPK models to guide drug development (DD) and human health risk assessment (HHRA) have been made with primary areas of application being incorporation of in vitro data for pharmacokinetic prediction in early drug development, interspecies scaling, intra-human scaling and, of special interest, prediction of drug-drug interaction potential. This article addresses the question 'Have physiologically-based pharmacokinetic models delivered?' through analysis of its promises and accomplishments in real-world situations. Progress on PBPK model use in DD and HHRA has been demonstrated, especially in the area of interspecies and adult-to-children scaling, although its actual application is not reflected in the number of published works. Future advances will depend on continued model development as well as integration of PBPK models with models of response and/or disease. More importantly, increased training along with managerial and regulatory support is imperative to the continued integration of PBPK modeling in both HHRA and DD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.588
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0110.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.204
GPT teacher head0.420
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2011
Admission routes2
Has abstractyes

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