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Prions: Novel Pathogens of Environmental Concern?

2006· article· en· W2018656377 on OpenAlexaboutno aff
Joel A. Pedersen, Katherine D. McMahon, Craig H. Benson

Bibliographic record

VenueJournal of Environmental Engineering · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPrion Diseases and Protein Misfolding
Canadian institutionsnot available
FundersU.S. Environmental Protection AgencyNational Science Foundation
KeywordsEnvironmental scienceEnvironmental planning

Abstract

fetched live from OpenAlex

On March 13, 2006, the U.S. Department of Agriculture announced the third case of bovine spongiform encephalopathy BSE or “mad cow” disease in the United States, the eighth confirmed case in North America. A ninth case was announced a month later by Canadian officials. While North America is not expected to experience a BSE outbreak of the magnitude as that in the United Kingdom 180,927 cases as of March 1, 2006, www.defra.gov.uk , the causal link between BSE and variant Creutzfeldt-Jakob disease vCJD in humans has focused government and industry attention on preventing human exposure to the disease agent. The geographic range of a related disease, chronic wasting disease CWD of North American cervids members of the deer family , has expanded rapidly in the last six years. Once believed to be confined to parts of northeastern Colorado and southeastern Wyoming, CWD is now present in captive and wild deer populations in fourteen states and two Canadian provinces www.nwhc.usgs.gov/disease-information/chronicwasting-disease/north-america-CWD-map.jsp . Management responses in several states and provinces have involved significant reductions in wild cervid populations and depopulation of game farms. There is no evidence that CWD is transmissible to humans, however, recent research has demonstrated the experimental transmission of CWD to squirrel monkeys Marsh et al. 2005 and that CWD agent is present in deer muscle Angers et al. 2006 . These findings may intensify concern by scientists, wildlife managers, and the general public about potential human exposure to CWD agent. BSE, CWD, CJD, and scrapie a natural infection of sheep and goats belong to a family of infectious, neurodegenerative diseases known as transmissible spongiform encephalopathies TSEs or prion diseases. TSEs are characterized by long incubation periods, spongiform degeneration of the brain, accumulation of PrPSc a misfolded form of a normally benign cell-surface prion protein PrPC , loss of coordination and, in humans, personality changes and memory loss Prusiner 1998 . These diseases have long preclinical phases, and once clinical symptoms

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.168
Threshold uncertainty score0.453

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.180
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2006
Admission routes1
Has abstractyes

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