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Record W2022523103 · doi:10.1163/1568562042459760

Polaron transport mechanism in DNA

2004· article· en· W2022523103 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Biomaterials Science Polymer Edition · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDNA and Nucleic Acid Chemistry
Canadian institutionsWestern University
Fundersnot available
KeywordsPolaronPhononCondensed matter physicsHelix (gastropod)Thermal conductionElectric fieldConductivityCharge carrierPercolation theoryPhysicsChemical physicsChemistryMaterials scienceQuantum mechanicsElectron

Abstract

fetched live from OpenAlex

A theory of polaron-hopping transport is studied in DNA in the presence of an electric field. The helix structure of DNA consists of a molecule of phosphoric acid, a molecule of sugar and a molecule of a nitrogen compound called a nitrogen base. The charge carriers are localized near the bases. Phonons are created due to internal motions such as changes in winding or the inclination angle of the helix. It is considered that, due to the interaction between a charge carrier and a phonon, a localized polaron is formed in the helix near a base. These internal motions also promote hopping of the localized polarons. By interacting with a phonon, the polaron undergoes a hopping process in the helix structure. We consider that the localized polaron sites are distributed randomly in both space and energy coordinates. A polaron hops from one site to another site in this space. Conduction is a result of many series of hops through this hopping space. This approach differs from the percolation method and others in the calculation of the conductivity. The present theory is used to explain the electric-field- and temperature-dependent conductivity experiments of DNA. A good agreement is found between theory and experiments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.321

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.233
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it