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Record W2025721312 · doi:10.1111/jph.12038

Differential Expression of Potato Defence Genes Associated with the Salicylic Acid Defence Signalling Pathway in Response to Weakly and Highly Aggressive Isolates of <i>Verticillium dahliae</i>

2012· article· en· W2025721312 on OpenAlexafffund
Holly Derksen, Mohamed Badawi, María Antonia Henríquez, Zhen Yao, Ahmed F. El‐Bebany, Fouad Daayf

Bibliographic record

VenueJournal of Phytopathology · 2012
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsVerticillium dahliaeBiologyVerticillium wiltCultivarSalicylic acidGene expressionGeneInoculationBotanyPlant disease resistanceHorticultureGenetics

Abstract

fetched live from OpenAlex

Abstract Verticillium wilt is a vascular disease affecting hundreds of important dicotyledonous crops worldwide. Its main causal agent in potato is Verticillium dahliae Kleb. A differential potato‐V. dahliae system consisting of two cultivars of potato (susceptible; S and moderately resistant; MR) and two V. dahliae isolates (weakly, WA and highly aggressive, HA), was used to evaluate the expression of five defence‐related genes, PAL1, PAL2, PR‐1, PR‐2 and PR‐5. These genes were selected because they are in general associated with the salicylic acid defence signalling pathway. Expression levels of these genes were assessed in potato roots and leaves at 0, 4 and 21 h (hpi), and 3, 7 and 14 days postinoculation (dpi). In the roots, the expression of PAL1, PR‐1 and PR‐2 in the MR was higher than in the susceptible cultivar in response to inoculation with either one of the tested V. dahliae isolates. PAL2 gene expression increased gradually starting at 21 hpi in the MR cultivar as opposed to the susceptible one. Higher expression of PR‐1 was detected at 7 dpi in roots. In the leaves, both PAL1 and PAL2 genes showed higher expression in the MR cultivar relative to the susceptible one. Interestingly, the expression of PR‐2 was slightly higher in the susceptible cultivar. Combined data analyses revealed that PAL1, PAL2, PR‐1 and PR‐2 genes are regulated at the transcriptional level in response to infection by V. dahliae. These results indicate that the salicylic acid pathway is also involved in potato defence against V. dahliae and add to the data gathered to elucidate the signalling mechanisms in this host–pathogen interaction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.222
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2012
Admission routes2
Has abstractyes

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