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Record W2027188172 · doi:10.1139/v05-128

Characterization and identification of disintegrins in <i>Crotalus</i> <i>horridus </i>venom by liquid chromatography and tandem matrix-assisted laser desorption ionization - quadrupole ion trap time-of-flight (MALDI-QIT-TOF) mass spectrometry

2005· article· en· W2027188172 on OpenAlexvenueno aff
Jacob A. Galán, Elda E. Sánchez, Sajid Bashir, John C. Pérez

Bibliographic record

VenueCanadian Journal of Chemistry · 2005
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVenomous Animal Envenomation and Studies
Canadian institutionsnot available
Fundersnot available
KeywordsChemistryMass spectrometryChromatographyVenomTandem mass spectrometrySnake venomMatrix-assisted laser desorption/ionizationQuadrupole ion trapSize-exclusion chromatographyFragmentation (computing)CrotalusTime-of-flight mass spectrometryMassIonizationIon trapDesorptionIonMass spectrumOrganic chemistryBiochemistry

Abstract

fetched live from OpenAlex

Two disintegrins were purified from the venom of Crotalus horridus by multiple-dimension liquid chromatography (MDLC) (specifically C18 reverse phase (RP) high-performance liquid chromatography followed by size exclusion chromatography (SEC), and anion exchange chromatography (SCX)). Both disintegrins were subjected to mass spectrometry to determine their intact molecular mass, the number of disulfide linkages, and protein sequence, respectively. These disintegrins were named horrdistatin 1 (nominal mass, 7231 Da) and horrdistatin 2 (nominal mass, 7451 Da), and had IC 50 (inhibitory concentrations) of 12.5 and 16.2 nmol/L (at 50%), respectively. For sequence confirmation from the C-terminal end, both disintegrins were derivatized using chemical-assisted fragmentation (CAF) and subsequently unzipped via collision-induced dissociation (CID) by matrix-assisted laser desorption – ionization – quadrupole ion trap time-of-flight (MALDI-QIT-TOF) mass spectrometry.Key words: disintegrins, mass spectrometry, snake venom, Timber rattlesnake, Crotalus horridus.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.024
Threshold uncertainty score0.538

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.201
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2005
Admission routes1
Has abstractyes

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