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Record W2028987453 · doi:10.1270/jsbbs.61.26

Genetic and molecular analysis of fasciation mutation in Japanese soybeans

2011· article· en· W2028987453 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueBreeding Science · 2011
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoybean genetics and cultivation
Canadian institutionsPlant Biotechnology Institute
Fundersnot available
KeywordsBiologyLocus (genetics)GeneticsAlleleGeneCandidate genePopulationPhenotype

Abstract

fetched live from OpenAlex

Soybean fasciation is controlled by a recessive gene affecting the shape of the aerial parts of the plant, which is characterized by flattened stem, infrequent branches and clustering of flowers and pods on shoot apices. Morphological feature of the fasciation mutation has been dissected, but molecular information is still limited. We developed three populations derived from the crosses between wild type cultivars and three Japanese fasciation varieties, Shakujodaizu, Taikadaizu and Shakujomame, respectively. The molecular mapping of the three F2 populations revealed that the fasciation locus (F locus) was mapped on the chromosome 2 (LG D1b). Fine mapping experiment with a population consisting of 1536 seeds derived from the F2 lines segregating for fasciation revealed that a DNA marker cosegregated with the fasciation phenotype. This DNA marker was dominant for wild type allele and the flanking region of this marker could not be amplified in Shakujodaizu as well as in the other two fasciation varieties, suggesting that some deletion or major rearrangement probably occurred at the f allele. Genomic information disclosed two predicted genes, Glyma02g36940 and Glyma02g36960, that were annotated in the vicinity of this DNA marker. The relationship between these candidate genes and the fasciation phenotype was discussed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.827
Threshold uncertainty score0.093

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.223
Teacher spread0.196 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it