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Genetic diversity across the range of a temperate lizard

2008· article· en· W2029720424 on OpenAlexaffabout
Briar J. Howes, Stephen C. Lougheed

Bibliographic record

VenueJournal of Biogeography · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsParks Canada
Fundersnot available
KeywordsGenetic diversityRange (aeronautics)EcologyBiologySkinkPopulationLizardPhylogeographyGeographyEvolutionary biologyDemographyGenetics

Abstract

fetched live from OpenAlex

Abstract Aim To examine range‐wide patterns of genetic diversity in association with range limits in a broadly distributed temperate lizard, and to identify the contributions of a series of environmental, geographical and historical variables to the observed patterns. Reduced genetic diversity may limit local adaptation in peripheral populations, thereby limiting their ability to adapt to marginal environmental conditions, possibly explaining the existence of temporally stable range limits. Location Various sampling locales throughout eastern and central USA and southern Ontario, Canada. Methods Genetic diversity of nuclear DNA microsatellites was estimated for each of 38 populations from across the range of eastern North America’s most broadly distributed lizard, the five‐lined skink, Plestiodon fasciatus (Linnaeus, 1758). Results Local climatic conditions and an interaction between distance from range border and glaciation history best predicted a population’s present‐day genetic diversity. Overall, peripheral populations had reduced genetic diversity relative to that of central populations, but this difference was attributable to the reduced genetic diversity in peripheral populations to the north and west that are not bordered by any obvious physical boundaries. Main conclusions Some, but not all, peripheral populations had reduced genetic diversity relative to that of more central populations, which probably arose through an interaction of ecological and historical factors. Peripheral populations that were bordered by an obvious boundary (e.g. an ocean) had higher diversity than peripheral populations that were not bordered by an obvious physical barrier to range expansion, suggesting that reduced intrapopulation genetic diversity is associated with range limits in the five‐lined skink.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.236

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.230
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2008
Admission routes2
Has abstractyes

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