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Record W2029736131 · doi:10.1016/j.bbi.2012.01.014

Minimum data elements for research reports on CFS

2012· article· en· W2029736131 on OpenAlexaff
Leonard A. Jason, Elizabeth R. Unger, Jordan D. Dimitrakoff, Adam P. Fagin, Michael Houghton, Dane B. Cook, Gailen D. Marshall, Nancy G. Klimas, Christopher R. Snell

Bibliographic record

VenueBrain Behavior and Immunity · 2012
Typearticle
Languageen
FieldMedicine
TopicFibromyalgia and Chronic Fatigue Syndrome Research
Canadian institutionsUniversity of Alberta
FundersNational Institutes of Health
KeywordsInterpretabilityConsistency (knowledge bases)Chronic fatigue syndromeMedicineData sciencePsychologyComputer sciencePhysical therapyArtificial intelligence

Abstract

fetched live from OpenAlex

Chronic fatigue syndrome (CFS) is a debilitating condition that has received increasing attention from researchers in the past decade. However, it has become difficult to compare data collected in different laboratories due to the variability in basic information regarding descriptions of sampling methods, patient characteristics, and clinical assessments. The issue of variability in CFS research was recently highlighted at the NIH's 2011 State of the Knowledge of CFS meeting prompting researchers to consider the critical information that should be included in CFS research reports. To address this problem, we present our consensus on the minimum data elements that should be included in all CFS research reports, along with additional elements that are currently being evaluated in specific research studies that show promise as important patient descriptors for subgrouping of CFS. These recommendations are intended to improve the consistency of reported methods and the interpretability of reported results. Adherence to minimum standards and increased reporting consistency will allow for better comparisons among published CFS articles, provide guidance for future research and foster the generation of knowledge that can directly benefit the patient.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.499
metaresearch head score (Gemma)0.762
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: Reporting
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.501
Threshold uncertainty score0.618

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.4990.762
Meta-epidemiology (narrow)0.0030.006
Meta-epidemiology (broad)0.0090.013
Bibliometrics0.0310.024
Science and technology studies0.0070.008
Scholarly communication0.0120.014
Open science0.0090.013
Research integrity0.0180.017
Insufficient payload (model declined to judge)0.0200.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.268
GPT teacher head0.477
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designTheoretical or conceptual
DomainReporting
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2012
Admission routes1
Has abstractyes

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