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Record W2033842297 · doi:10.1139/b08-032

Dispersal in a sterile lichen-forming fungus,<i>Thamnolia subuliformis</i>(Ascomycotina: Icmadophilaceae)This paper is one of a selection of papers published in the Special Issue on Systematics Research.

2008· article· en· W2033842297 on OpenAlexafffundvenueabout
David M. Cassie, Michele D. Piercey‐Normore

Bibliographic record

VenueBotany · 2008
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of CanadaParks Canada
KeywordsBiologyThallusLichenBiological dispersalPopulationGene flowLocus (genetics)Fragmentation (computing)IntronBotanyEcologyEvolutionary biologyGeneticsGeneGenetic variationDemography

Abstract

fetched live from OpenAlex

Thamnolia subuliformis (Ehrh.) Culb. is a sterile lichen-forming ascomycete with no known sexual or vegetative reproductive structures except fragments of thallus branches. The open tundra in northern Manitoba contains fragments of T. subuliformis randomly scattered over the landscape, giving the appearance that dispersal is common. This may provide a misleading impression of gene flow, but similar fragmentation is seen in seven other locally occurring species of lichen-forming fungi. The primary objective of this study was to examine the population structure of T. subuliformis using four multilocus markers (interspersed simple sequence repeats; ISSR) and a single locus marker (the presence/absence of a group I intron in the nuclear 18S rDNA locus). Significant population subdivision is reported for two different classifications of what constitutes a population. Thallus fragments of T. subuliformis may be intact and slow growing, having accumulated tissue over a long period of time, with low levels of gene flow occurring in localized areas. The presence of the group 1 intron in localized transects may suggest either that the intron was introduced recently and has not had sufficient time to disperse among populations, or that it has been lost in other locations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.634
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0060.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.256
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2008
Admission routes4
Has abstractyes

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