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Record W2035538498 · doi:10.1118/1.3182471

WE‐C‐BRC‐03: Evaluating Extent of Cell Death in 3D Mid‐To‐High Frequency Ultrasound by Registration with Whole‐Mount Tumor Histopathology

2009· article· en· W2035538498 on OpenAlexaff
Raluca Maria Vlad, Michael C. Kolios, Joanne Moseley, Gregory J. Czarnota, K. Brock

Bibliographic record

VenueMedical Physics · 2009
Typearticle
Languageen
FieldEngineering
TopicUltrasound and Hyperthermia Applications
Canadian institutionsSunnybrook Health Science Centre
Fundersnot available
KeywordsUltrasoundHistologyHistopathologyMedicineRadiation therapyNuclear medicineRadiologyPathology

Abstract

fetched live from OpenAlex

Purpose: In this study, we investigate the precision and accuracy of mid‐to‐high frequency ultrasound imaging to assess non‐invasively cell death for incorporation of this method in pre‐clinical and clinical practice to characterize tumor response to radiotherapy. Method and Materials: Tumor xenografts (n=8) of head and neck cancer were exposed to radiation doses of 2, 4 and 8Gy. Ultrasound images were collected with an ultrasound scanner using frequencies of 15–35MHz before and 24 hours after exposure to radiation. Irradiated tumors exhibited large hyperechoic regions in ultrasounds images 24 hours after exposure to radiation that corresponded to areas of cell death in histology. The ultrasound images were registered with the histological images of the tumor slices taken at regular intervals. The tumor was contoured on histological slices and ultrasound images, the regions of cell death were contoured on histological slices and the hyperechoic regions were contoured on ultrasound images. Each set of contours was converted to a surface mesh. The volume and center of mass were calculated for each representation determined by a surface mesh. Results: The average difference between the relative (to histology) volume representations in histology and ultrasound were 10.7%±8.9% for tumor and 21.7%±12.2% for cell death. The average differences between the relative (to the maximum dimension of the tumor) center of mass of volume representations in histology and ultrasound images were 2.7%±2.0% for tumor and 15.5%±8.9 % for cell death. Conclusion: The method provides the correspondence between the volumes of cell death assessed from histology and from ultrasound imaging and can be used to assess early tumor response to radiotherapy. Part of the differences associated with cell death representation in histological and ultrasound images (21.7%) was caused by the differences in tumor representation (10.7%) in these images. The effect of these uncertainties is the subject of ongoing investigation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.245
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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