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Record W2039172491 · doi:10.1139/z07-091

Serendipitous discovery of a novel protostrongylid (Nematoda: Metastrongyloidea) in caribou, muskoxen, and moose from high latitudes of North America based on DNA sequence comparisons

2007· article· en· W2039172491 on OpenAlexaffvenueabout
Susan Kutz, Ingrid M. Asmundsson, Eric P. Hoberg, Greg D. Appleyard, Emily Jenkins, Kimberlee B. Beckmen, Marsha Branigan, Lem G. Butler, Neil B. Chilton, Dorothy Cooley, Brett Elkin, Florence Huby‐Chilton, Deborah L. Johnson, Abdurakhim Kuchboev, John Nagy, Michelle Oakley, Lydden Polley, Richard Popko, Aedes Scheer, Manon Simard, Alasdair M. Veitch

Bibliographic record

VenueCanadian Journal of Zoology · 2007
Typearticle
Languageen
FieldVeterinary
TopicHelminth infection and control
Canadian institutionsProvincial Laboratory of Public HealthUniversity of CalgaryEnvironment and Climate Change Canada
Fundersnot available
KeywordsBiologyZoologyUngulateEcologyHabitat

Abstract

fetched live from OpenAlex

Fecal samples are often the only feasible means to assess diversity of parasites in wildlife; however, definitive identification of egg or larval stages in feces by morphology is rarely possible. We determined partial sequences from the second internal transcribed spacer region (ITS-2) of nuclear ribosomal DNA for first-stage, dorsal-spined larvae (DSL) in feces from caribou ( Rangifer tarandus tarandus (L., 1758), Rangifer tarandus caribou (Gmelin, 1788), Rangifer tarandus grantii (Allen, 1902)), muskoxen ( Ovibos moschatus moschatus (Zimmermann, 1780), Ovibos moschatus wardi Lydekker, 1900), moose ( Alces alces gigas Miller, 1899 and Alces alces andersoni Peterson, 1952), and from the tissue of one slug ( Deroceras laeve (Müller, 1774)) in Arctic–Subarctic North America. A previously uncharacterized, genetically distinct species was recognized based on sequences of 37 DSL from 19 ungulate hosts and the slug. Sequence similarity among individuals of this novel species was 91%–100%. For many individual DSL, paralogues of ITS-2 were detected. ITS-2 sequences from the novel species were 72%–77% similar to those of Varestrongylus alpenae (Dikmans, 1935) and 51%–61% similar to those of other protostrongylids known in North American and some Eurasian ungulates. Results indicate a discrete lineage of an undescribed protostrongylid infecting muskoxen, caribou, and moose from Alaska to Labrador. Sympatric infections with Parelaphostrongylus andersoni Prestwood, 1972 were found in three caribou herds.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.296
Threshold uncertainty score0.934

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.289
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations54
Published2007
Admission routes3
Has abstractyes

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