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Record W2040483478 · doi:10.1139/x04-134

Bidirectional introgression between<i>Pinus taeda</i>and<i>Pinus echinata</i>: evidence from morphological and molecular data

2004· article· en· W2040483478 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCanadian Journal of Forest Research · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsnot available
FundersU.S. Forest ServiceOklahoma State University
KeywordsIntrogressionHybridBiologyBotanyPopulationChloroplast DNALoblolly pineBackcrossingPinus <genus>GeneticsGeneGenome

Abstract

fetched live from OpenAlex

The frequency of mature hybrids, including post-F 1 individuals, between loblolly (Pinus taeda L.) and shortleaf pine (Pinus echinata Mill.), detectable with a codominant nuclear marker, was studied in a sympatric population from central Arkansas. The direction of introgression was also examined. The marker revealed 10 putative hybrids from the 80 trees sampled. PCR-RFLP analysis of their rbcL gene showed two of the putative hybrids (HL) share loblolly pine chloroplast DNA, and eight (HS) share the shortleaf pine chloroplast DNA. The two putative HL hybrids were morphologically similar to loblolly pine, and the eight putative HS hybrids were morphologically similar to shortleaf pine. Utilizing microsatellite data, Nei's measure of genetic identity showed the putative HL hybrids to be similar to loblolly pine, and the putative HS hybrids as being similar to shortleaf pine. An inferred tree of the individuals, using simple sequence repeat data and the neighbor-joining method, also suggested that some of the putative hybrids were not F 1 individuals. Principle component analysis of the morphological characters groups the HL trees with loblolly pine and the HS trees with shortleaf pine. These results suggest bidirectional introgression occurred within the study population, and some of the putative hybrids were likely derived from early-generation backcross(es) with either shortleaf or loblolly pine.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.108
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.066
GPT teacher head0.342
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it