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Record W2040833920 · doi:10.1139/f06-150

The genetic structure of Atlantic cod (G<i>adus morhua)</i> around Iceland: insight from microsatellites, the <i>Pan</i> I locus, and tagging experiments

2006· article· en· W2040833920 on OpenAlexvenueno aff
Christophe Pampoulie, Daniel E. Ruzzante, Valérie Chosson, Thóra Dögg Jörundsdóttir, Lorna Taylor, Vilhjálmur Þorsteinsson, Anna Kristín Daníelsdóttir, Guðrún Marteinsdóttir

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2006
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsnot available
Fundersnot available
KeywordsGadusMicrosatelliteAtlantic codAnalysis of molecular varianceLocus (genetics)BiologyGenetic structureLoss of heterozygosityGenetic variationGadidaeEcologyAlleleEvolutionary biologyZoologyGeographyFisheryGeneticsFish <Actinopterygii>Gene

Abstract

fetched live from OpenAlex

Allelic variation at nine microsatellite loci and the Pan I locus provides evidence that Atlantic cod (Gadus morhua) around Iceland is genetically structured (F ST = 0.003 and F ST = 0.261, respectively). A total of 2534 cod were sampled at 22 spawning locations. For both types of markers, most of the significant pairwise F ST resulted from northeastern–southwestern comparisons. A multidimensional scaling analysis based on F ST , a spatial hierarchical analysis of molecular variance (SAMOVA) and a hierarchical analysis of molecular variance (AMOVA), conducted on both types of markers confirmed a genetic differentiation between cod from the northeastern and southwestern regions. Genetic discontinuities were revealed across two main current fronts in the southeast and northwest, where the cold and warm water masses meet. The AMOVA also detected genetic differences with depth. Expected and observed heterozygosity of microsatellite loci significantly decreased with depth, whereas the B allele frequency at the Pan I locus increased. A tagging experiment of spawning fish conducted during the same years as the genetic work revealed that tagged individuals released in the southwestern region seldom migrated to the northeastern region and vice versa, suggesting that the southwestern and northeastern populations of Atlantic cod around Iceland represent two distinct spawning components.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.179
Threshold uncertainty score0.976

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.002
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.183
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations132
Published2006
Admission routes1
Has abstractyes

Explore more

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